RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 SSH3Q8TE77 659 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 ATP6V0A4Q9HBG4 840 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 SLC39A2Q9NP94 309 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 STK38LQ9Y2H1 464 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 SLC8A3P57103 927 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 DDB1Q16531 1140 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 GIPC2Q8TF65 315 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 ERP27Q96DN0 273 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 KAZALD1Q96I82 304 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 OSBPL1AQ9BXW6 950 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 ANKRD33BA6NCL7 494 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 ENC1O14682 589 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 HSF2BPO75031 334 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 CHMLP26374 656 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 RCN1Q15293 331 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 BZW1Q7L1Q6 419 aaKnown RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 MAATS1Q7Z4T9 603 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 TBC1D1Q86TI0 1168 aaPredicted RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 SAMD14Q8IZD0 417 aaPredicted RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 RASSF8Q8NHQ8 419 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■□□□ 12.4
CALD1-201ENST00000361675 DDX27Q96GQ7 796 aaKnown RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 PGBD1Q96JS3 809 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 TBX4P57082 545 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 MPP3Q13368 585 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 POLA2Q14181 598 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 MTF1Q14872 753 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 COBLL1Q53SF7 1204 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 Q6ZUG5 572 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 DHX40Q8IX18 779 aaKnown RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.06□□□□□ -0.8
CALD1-201ENST00000361675 ALS2Q96Q42 1657 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 FANCGO15287 622 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 CYP27B1O15528 508 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 ANP32DO95626 131 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 ATF3P18847 181 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 DNA2P51530 1060 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 OLFM4Q6UX06 510 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 LMNTD2Q8IXW0 634 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 HELQQ8TDG4 1101 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 BHMTQ93088 406 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 BATF3Q9NR55 127 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 RTEL1Q9NZ71 1219 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 GUCA1BQ9UMX6 200 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
CALD1-201ENST00000361675 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
CALD1-201ENST00000361675 OPA1O60313 960 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 LDHAP00338 332 aaKnown RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 S100BP04271 92 aaPredicted RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 STK38Q15208 465 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 SYCP2LQ5T4T6 812 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 CPLX4Q7Z7G2 160 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 TEKT4Q8WW24 435 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 RPGRQ92834 1020 aaKnown RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 IWS1Q96ST2 819 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 TMA7Q9Y2S6 64 aaKnown RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 ZNF24P17028 368 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 CEP128Q6ZU80 1094 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 KLHDC4Q8TBB5 520 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 TRIM7Q9C029 511 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 VCPKMTQ9H867 229 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 SNX14Q9Y5W7 946 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 M0R2C6 588 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 LSM1O15116 133 aaKnown RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 EVI5O60447 810 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 TAF11Q15544 211 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 NCAPG2Q86XI2 1143 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 TCHPQ9BT92 498 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 NOD2Q9HC29 1040 aa10.05□□□□□ -0.8
CALD1-201ENST00000361675 BZW2Q9Y6E2 419 aaKnown RBP10.05□□□□□ -0.8
CALD1-201ENST00000361675 FSBPO95073 299 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 SYF2O95926 243 aaKnown RBP10.04□□□□□ -0.8
CALD1-201ENST00000361675 TRPC1P48995 793 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 ZNF132P52740 706 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
CALD1-201ENST00000361675 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 FUKQ8N0W3 1084 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 PI4K2BQ8TCG2 481 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 MIPOL1Q8TD10 442 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 SNRNP27Q8WVK2 155 aaKnown RBP10.04□□□□□ -0.8
CALD1-201ENST00000361675 BRF1Q92994 677 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 ZNF496Q96IT1 587 aaPredicted RBP10.04□□□□□ -0.8
CALD1-201ENST00000361675 USP28Q96RU2 1077 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 MUC3BQ9H195 1237 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 HPCAL4Q9UM19 191 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 CACNA1FO60840 1977 aa10.04□□□□□ -0.8
CALD1-201ENST00000361675 PARP1P09874 1014 aaKnown RBP10.04□□□□□ -0.8
CALD1-201ENST00000361675 PHKG2P15735 406 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms