RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 HLFQ16534 295 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 ATL3Q6DD88 541 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 NLRP10Q86W26 655 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 C3orf58Q8NDZ4 430 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 TTLL11Q8NHH1 800 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 APPBP2Q92624 585 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 XYLBO75191 536 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 FGAP02671 866 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 FDPSP14324 419 aaKnown RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 BTLAQ7Z6A9 289 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 KIAA0825Q8IV33 1275 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 SYNE4Q8N205 404 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 VGLL2Q8N8G2 317 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 CHMP4CQ96CF2 233 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 PUS7LQ9H0K6 701 aaKnown RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 TTC12Q9H892 705 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 NCOA5Q9HCD5 579 aaKnown RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 FAM8A1Q9UBU6 413 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 KIF3AQ9Y496 699 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 LRP6O75581 1613 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 BCL9O00512 1426 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 PAGE1O75459 146 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 NR5A1Q13285 461 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 GORABQ5T7V8 394 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 CHST3Q7LGC8 479 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 MB21D2Q8IYB1 491 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 TRIM55Q9BYV6 548 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 SPTLC3Q9NUV7 552 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 PGPEP1Q9NXJ5 209 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 SNTG2Q9NY99 539 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 WASF2Q9Y6W5 498 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 AKAP11Q9UKA4 1901 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 RRP9O43818 475 aaKnown RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 CYP19A1P11511 503 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 INPP5BP32019 993 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 MAP3K10Q02779 954 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 NOLC1Q14978 699 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 IMMTQ16891 758 aaKnown RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 ANO6Q4KMQ2 910 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 LUZP1Q86V48 1076 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 ZNF296Q8WUU4 475 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 RNPC3Q96LT9 517 aaKnown RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 GREM2Q9H772 168 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 CBX8Q9HC52 389 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 POLMQ9NP87 494 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-202ENST00000360642 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
CLCN3-202ENST00000360642 ANKRD36CQ5JPF3 1778 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 SASH3O75995 380 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 ITGA6P23229 1130 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 PTGIRP43119 386 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 MCAMP43121 646 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 SNW1Q13573 536 aaKnown RBP8.47□□□□□ -1.05
CLCN3-202ENST00000360642 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 VPS37DQ86XT2 251 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 GOLM1Q8NBJ4 401 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 BICD2Q8TD16 824 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 SNX29Q8TEQ0 813 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 KCNF1Q9H3M0 494 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 MYH7P12883 1935 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 TPM3P06753 285 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 CTSWP56202 376 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 KCNC4Q03721 635 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 ATP2B3Q16720 1220 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 CTC1Q2NKJ3 1217 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 TAF7LQ5H9L4 462 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 WDR19Q8NEZ3 1342 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 TDRD7Q8NHU6 1098 aaKnown RBP8.47□□□□□ -1.05
CLCN3-202ENST00000360642 USP28Q96RU2 1077 aa8.47□□□□□ -1.05
CLCN3-202ENST00000360642 FAM126AQ9BYI3 521 aaPredicted RBP8.47□□□□□ -1.05
CLCN3-202ENST00000360642 ATRNO75882 1429 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 PARNO95453 639 aaKnown RBP8.46□□□□□ -1.05
CLCN3-202ENST00000360642 CAVIN2O95810 425 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 CES1P23141 567 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 EIF4A3P38919 411 aaKnown RBP8.46□□□□□ -1.05
CLCN3-202ENST00000360642 ANTXR2P58335 489 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 SASS6Q6UVJ0 657 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 ENGASEQ8NFI3 743 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 KLF16Q9BXK1 252 aaPredicted RBP8.46□□□□□ -1.05
CLCN3-202ENST00000360642 FTOQ9C0B1 505 aaKnown RBP eCLIP8.46□□□□□ -1.052e-7■□□□□ 9
CLCN3-202ENST00000360642 RUBCNLQ9H714 662 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 FANCLQ9NW38 375 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 BTG4Q9NY30 223 aa8.46□□□□□ -1.05
CLCN3-202ENST00000360642 MYH3P11055 1940 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 FAM86C2PA6NEL3 165 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 GPAA1O43292 621 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 ADD2P35612 726 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 HIRAP54198 1017 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-202ENST00000360642 METTL24Q5JXM2 366 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 KIAA1524Q8TCG1 905 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 CEP63Q96MT8 703 aa8.46□□□□□ -1.06
CLCN3-202ENST00000360642 ZNF396Q96N95 335 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-202ENST00000360642 GOLPH3LQ9H4A5 285 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms