RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SNX1Q13596 522 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 POTEBQ6S5H4 581 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 KDM1AO60341 852 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 LMNAP02545 664 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 TMOD1P28289 359 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 PODNQ7Z5L7 613 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 TUBB6Q9BUF5 446 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 TOP2BQ02880 1626 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 ZBED4O75132 1171 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 XPAP23025 273 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 ADAT2Q7Z6V5 191 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 CNOT10Q9H9A5 744 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 KRT82Q9NSB4 513 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 TADA3O75528 432 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 SUFUQ9UMX1 484 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 WASLO00401 505 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 STAM2O75886 525 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 EPHB4P54760 987 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 GIMAP4Q9NUV9 329 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 ATF2P15336 505 aa14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 PACSIN2Q9UNF0 486 aaPredicted RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 YARSP54577 528 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 MRPL44Q9H9J2 332 aaKnown RBP14.38□□□□□ -0.11
SRGAP3-201ENST00000360413 SOS2Q07890 1332 aaPredicted RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 ATP8B2P98198 1209 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 DDX5P17844 614 aaKnown RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 TERF2Q15554 542 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 PTPROQ16827 1216 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 DAAM1Q9Y4D1 1078 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 ABCB4P21439 1286 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 GRAMD1BQ3KR37 738 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 GJC2Q5T442 439 aaPredicted RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 NIP7Q9Y221 180 aaKnown RBP eCLIP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 FAM173BQ6P4H8 233 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 MAGEB6Q8N7X4 407 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 FBXO18Q8NFZ0 1043 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 ZCRB1Q8TBF4 217 aaKnown RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 CYTH2Q99418 400 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 HARSP12081 509 aaKnown RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 TRMT10CQ7L0Y3 403 aaKnown RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 NLRC4Q9NPP4 1024 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 KCNJ18B7U540 433 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 POC1B-GALNT4F8VUJ3 575 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 RNF113AO15541 343 aaKnown RBP14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 RWDD2BP57060 319 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 KCNJ12Q14500 433 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 TMEM259Q4ZIN3 620 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
SRGAP3-201ENST00000360413 LSM14BQ9BX40 385 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 PTPN22Q9Y2R2 807 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 ZMYND10O75800 440 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 PMS1P54277 932 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 HP1BP3Q5SSJ5 553 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 MSH2P43246 934 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 ARHGEF18Q6ZSZ5 1173 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 ZBTB8OSQ8IWT0 167 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 SKA2Q8WVK7 121 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 ZNF212Q9UDV6 495 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 CDC23Q9UJX2 597 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 CALCRLQ16602 461 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 TBC1D22AQ8WUA7 517 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 AS3MTQ9HBK9 375 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 PYCARDQ9ULZ3 195 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 PHLPP2Q6ZVD8 1323 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 E9PMD0 336 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 NBPF9Q3BBW0 867 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 CAPRIN2Q6IMN6 1127 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 FGD4Q96M96 766 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 TBC1D7Q9P0N9 293 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 FAM170AA1A519 330 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 IRX1P78414 480 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 PIK3AP1Q6ZUJ8 805 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 IQCB1Q15051 598 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 ATG3Q9NT62 314 aa14.36□□□□□ -0.11
SRGAP3-201ENST00000360413 KRT26Q7Z3Y9 468 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 DNMBPQ6XZF7 1577 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 LMCD1Q9NZU5 365 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 PCDHB13Q9Y5F0 798 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
SRGAP3-201ENST00000360413 CLCN6P51797 869 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms