RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 A0A1W2PQ64 194 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 A0A1W2PQD8 194 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 HLA-DOAP06340 250 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 PFKFB1P16118 471 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 NOVP48745 357 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 ETF1P62495 437 aaKnown RBP21.08■□□□□ 0.97
SNX11-201ENST00000359238 CCDC73Q6ZRK6 1079 aa21.08■□□□□ 0.97
SNX11-201ENST00000359238 FER1L6Q2WGJ9 1857 aa21.08■□□□□ 0.96
SNX11-201ENST00000359238 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.96
SNX11-201ENST00000359238 IGKV6D-41A0A0C4DH26 115 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 CLRN2A0PK11 232 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 CCP110O43303 1012 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 NRDCO43847 1150 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 ARMCX5Q6P1M9 558 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 OGFOD1Q8N543 542 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 SMARCE1Q969G3 411 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 UBA5Q9GZZ9 404 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 MTMR4Q9NYA4 1195 aa21.07■□□□□ 0.96
SNX11-201ENST00000359238 SHTN1A0MZ66 631 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 SPDYE2BA6NHP3 402 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 KLRF2D3W0D1 207 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 KINO60870 393 aaKnown RBP21.06■□□□□ 0.96
SNX11-201ENST00000359238 TADA3O75528 432 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 SPDYE6P0CI01 402 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 SFPQP23246 707 aaKnown RBP eCLIP21.06■□□□□ 0.96
SNX11-201ENST00000359238 KIF5BP33176 963 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 KRT2P35908 639 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 PRELPP51888 382 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 JAG1P78504 1218 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 WWC2Q6AWC2 1192 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 SCAF8Q9UPN6 1271 aaKnown RBP21.06■□□□□ 0.96
SNX11-201ENST00000359238 EFCAB8A8MWE9 144 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 NT5C2P49902 561 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 IRX3P78415 501 aaPredicted RBP21.06■□□□□ 0.96
SNX11-201ENST00000359238 USP49Q70CQ1 688 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 HDAC9Q9UKV0 1011 aa21.06■□□□□ 0.96
SNX11-201ENST00000359238 DLGAP5Q15398 846 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 CIAPIN1Q6FI81 312 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 CDAN1Q8IWY9 1227 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 MNS1Q8NEH6 495 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 VAT1LQ9HCJ6 419 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 CWC15Q9P013 229 aaKnown RBP21.05■□□□□ 0.96
SNX11-201ENST00000359238 TCP10L2B9ZVM9 353 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 PPP6R2O75170 966 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 TNNT3P45378 269 aaPredicted RBP21.05■□□□□ 0.96
SNX11-201ENST00000359238 RRP1BQ14684 758 aaKnown RBP21.05■□□□□ 0.96
SNX11-201ENST00000359238 HOMER1Q86YM7 354 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 SPON1Q9HCB6 807 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 FBXO2Q9UK22 296 aaPredicted RBP21.05■□□□□ 0.96
SNX11-201ENST00000359238 PLIN4Q96Q06 1357 aa21.05■□□□□ 0.96
SNX11-201ENST00000359238 ZNF202O95125 648 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 PDHBP11177 359 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 CMA1P23946 247 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 OAS2P29728 719 aaKnown RBP21.04■□□□□ 0.96
SNX11-201ENST00000359238 ZSCAN26Q16670 478 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.04■□□□□ 0.96
SNX11-201ENST00000359238 SWAP70Q9UH65 585 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
SNX11-201ENST00000359238 TBC1D8O95759 1140 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 TOP1P11387 765 aaKnown RBP21.04■□□□□ 0.96
SNX11-201ENST00000359238 NLRP5P59047 1200 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 CCDC178Q5BJE1 867 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 PIK3AP1Q6ZUJ8 805 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 BPIFA3Q9BQP9 254 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 RSPH14Q9UHP6 348 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 HPSEQ9Y251 543 aa21.04■□□□□ 0.96
SNX11-201ENST00000359238 RILPL1Q5EBL4 403 aa21.03■□□□□ 0.96
SNX11-201ENST00000359238 AGBL3Q8NEM8 1001 aa21.03■□□□□ 0.96
SNX11-201ENST00000359238 DHX36Q9H2U1 1008 aaKnown RBP21.03■□□□□ 0.96
SNX11-201ENST00000359238 DNAI1Q9UI46 699 aa21.03■□□□□ 0.96
SNX11-201ENST00000359238 SEC31AO94979 1220 aaKnown RBP21.03■□□□□ 0.96
SNX11-201ENST00000359238 HEATR3Q7Z4Q2 680 aa21.03■□□□□ 0.96
SNX11-201ENST00000359238 XPO4Q9C0E2 1151 aaKnown RBP21.03■□□□□ 0.96
SNX11-201ENST00000359238 PSD3Q9NYI0 1048 aa21.03■□□□□ 0.96
SNX11-201ENST00000359238 PI4KBQ9UBF8 816 aa21.03■□□□□ 0.96
SNX11-201ENST00000359238 MYO1CO00159 1063 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 PARP1P09874 1014 aaKnown RBP21.02■□□□□ 0.96
SNX11-201ENST00000359238 ATP2B2Q01814 1243 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 SMC1AQ14683 1233 aaKnown RBP21.02■□□□□ 0.96
SNX11-201ENST00000359238 ZNF174Q15697 407 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 TTBK2Q6IQ55 1244 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 PIGSQ96S52 555 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 EHD4Q9H223 541 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 VEZTQ9HBM0 779 aa21.02■□□□□ 0.96
SNX11-201ENST00000359238 STXBP3O00186 592 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 FOXN1O15353 648 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 SASH3O75995 380 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 GDF11O95390 407 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 XBP1P17861 261 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 RESP18Q5W5W9 173 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 CC2D1AQ6P1N0 951 aaPredicted RBP21.01■□□□□ 0.95
SNX11-201ENST00000359238 TRIM65Q6PJ69 517 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 GOLGA5Q8TBA6 731 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 ZNF70Q9UC06 446 aaPredicted RBP21.01■□□□□ 0.95
SNX11-201ENST00000359238 NOP2P46087 812 aaKnown RBP21.01■□□□□ 0.95
SNX11-201ENST00000359238 SIAH1Q8IUQ4 282 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 FHDC1Q9C0D6 1143 aaPredicted RBP21.01■□□□□ 0.95
SNX11-201ENST00000359238 GPCPD1Q9NPB8 672 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 TMOD2Q9NZR1 351 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms