RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
VCP-201ENST00000358901 CAPS2Q9BXY5 557 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 PARD6BQ9BYG5 372 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 GAS7O60861 476 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 RASSF7Q02833 373 aa15.13■□□□□ 0.01
VCP-201ENST00000358901 EEF1GP26641 437 aaKnown RBP15.12■□□□□ 0.01
VCP-201ENST00000358901 KCTD16Q68DU8 428 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 DCUN1D2Q6PH85 259 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 FAM204AQ9H8W3 233 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 STK24Q9Y6E0 443 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 RGS16O15492 202 aaPredicted RBP15.12■□□□□ 0.01
VCP-201ENST00000358901 SIK1P57059 783 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 CYP4A11Q02928 519 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 PLEKHG1Q9ULL1 1385 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 CYP2D7A0A087X1C5 515 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 PPFIA4O75335 1185 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 LIG3P49916 1009 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 SARM1Q6SZW1 724 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 GJA10Q969M2 543 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 SRPRBQ9Y5M8 271 aaKnown RBP15.12■□□□□ 0.01
VCP-201ENST00000358901 FAM169AQ9Y6X4 670 aa15.12■□□□□ 0.01
VCP-201ENST00000358901 ATP8B1O43520 1251 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 NCBP1Q09161 790 aaKnown RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 NAA30Q147X3 362 aaPredicted RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 NAA35Q5VZE5 725 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 BAIAP2L1Q9UHR4 511 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 CCDC160A6NGH7 325 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 GAS8O95995 478 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 KRT15P19012 456 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 IL6STP40189 918 aaPredicted RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 ZNF354CQ86Y25 554 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 UHMK1Q8TAS1 419 aaKnown RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 H7C1W4 665 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 BTDP43251 543 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 VPS41P49754 854 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 PPFIBP2Q8ND30 876 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 GOLGA5Q8TBA6 731 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 DDX25Q9UHL0 483 aaKnown RBP15.11■□□□□ 0.01
VCP-201ENST00000358901 FAN1Q9Y2M0 1017 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 CAPN7Q9Y6W3 813 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 ZFYVE16Q7Z3T8 1539 aa15.11■□□□□ 0.01
VCP-201ENST00000358901 TTC19Q6DKK2 380 aaPredicted RBP15.1■□□□□ 0.01
VCP-201ENST00000358901 P2RX5Q93086 422 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 CD19P15391 556 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 ARL1P40616 181 aaPredicted RBP15.1■□□□□ 0.01
VCP-201ENST00000358901 CYP27A1Q02318 531 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 STRN3Q13033 797 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 TRPC3Q13507 836 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 LRRC41Q15345 812 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 ANKRD42Q8N9B4 389 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 CCT5P48643 541 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 TEKT1Q969V4 418 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 GOLGA8KD6RF30 607 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
VCP-201ENST00000358901 ATP11AP98196 1134 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 RASGRF1Q13972 1273 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 FAM178BQ8IXR5 827 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 LARP4BQ92615 738 aaKnown RBP15.1■□□□□ 0.01
VCP-201ENST00000358901 STMN2Q93045 179 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 KIFC2Q96AC6 838 aa15.1■□□□□ 0.01
VCP-201ENST00000358901 DHTKD1Q96HY7 919 aaPredicted RBP15.1■□□□□ 0.01
VCP-201ENST00000358901 SNAP23O00161 211 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
VCP-201ENST00000358901 SCNN1DP51172 638 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 CLUL1Q15846 466 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 PPP1R21Q6ZMI0 780 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 APBB1IPQ7Z5R6 666 aaPredicted RBP15.09■□□□□ 0.01
VCP-201ENST00000358901 FAM184BQ9ULE4 1060 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 PCDHA1Q9Y5I3 950 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 CXCR5P32302 372 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 ZNF658Q5TYW1 1059 aaPredicted RBP15.09■□□□□ 0.01
VCP-201ENST00000358901 TTLL11Q8NHH1 800 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
VCP-201ENST00000358901 GOLPH3LQ9H4A5 285 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 TRPM1Q7Z4N2 1603 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 IFNB1P01574 187 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 MCAMP43121 646 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 EXOC3L4Q17RC7 722 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 HHATQ5VTY9 493 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 KRT12Q99456 494 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 CARD10Q9BWT7 1032 aa15.09■□□□□ 0.01
VCP-201ENST00000358901 HEG1Q9ULI3 1381 aa15.08■□□□□ 0.01
VCP-201ENST00000358901 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0.01
VCP-201ENST00000358901 PNMA6AP0CW24 399 aaPredicted RBP15.08■□□□□ 0.01
VCP-201ENST00000358901 PCK1P35558 622 aa15.08■□□□□ 0.01
VCP-201ENST00000358901 CEP128Q6ZU80 1094 aa15.08■□□□□ 0.01
VCP-201ENST00000358901 CUEDC2Q9H467 287 aa15.08■□□□□ 0.01
VCP-201ENST00000358901 FEZ2Q9UHY8 353 aaPredicted RBP15.08■□□□□ 0.01
VCP-201ENST00000358901 TNNI1P19237 187 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms