RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 C1orf146Q5VVC0 180 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 E4F1Q66K89 784 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-203ENST00000358544 BICDL1Q6ZP65 573 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 HOOK2Q96ED9 719 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 CD248Q9HCU0 757 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 CCDC61Q9Y6R9 512 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 MRPS25P82663 173 aaKnown RBP6.65□□□□□ -1.35
VPS13B-203ENST00000358544 LGSNQ5TDP6 509 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 NAA35Q5VZE5 725 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 MAP7D3Q8IWC1 876 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 STOML1Q9UBI4 398 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 ZNF711Q9Y462 761 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 SCN8AQ9UQD0 1980 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 MRPS35P82673 323 aaKnown RBP6.65□□□□□ -1.35
VPS13B-203ENST00000358544 TUBB6Q9BUF5 446 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 ARHGAP10A1A4S6 786 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 N4BP1O75113 896 aaKnown RBP6.65□□□□□ -1.35
VPS13B-203ENST00000358544 LRIG3Q6UXM1 1119 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 SCYL3Q8IZE3 742 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 TMEM60Q9H2L4 133 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 SLC52A1Q9NWF4 448 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 F5P12259 2224 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 H7C1D1 291 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 NBPF20Q3BBV1 942 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 APLFQ8IW19 511 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-203ENST00000358544 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.65□□□□□ -1.35
VPS13B-203ENST00000358544 ZFP69BQ9UJL9 534 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 PLEKHG2Q9H7P9 1386 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 CCND1P24385 295 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 RIMS2Q9UQ26 1411 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ATP5J2-PTCD1G3V325 749 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 GRM8O00222 908 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ADCY8P40145 1251 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 GLE1Q53GS7 698 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 KSR2Q6VAB6 950 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 LINS1Q8NG48 757 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 SNRNP27Q8WVK2 155 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 RHBDL2Q9NX52 303 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PACSIN2Q9UNF0 486 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ADCY9O60503 1353 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 GRAMD1BQ3KR37 738 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 USHBP1Q8N6Y0 703 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ZMYND12Q9H0C1 365 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 NDE1Q9NXR1 346 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 TCOF1Q13428 1488 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 KRT31Q15323 416 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PTGISQ16647 500 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PIK3AP1Q6ZUJ8 805 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ENOX1Q8TC92 643 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 CCT8L2Q96SF2 557 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 L2HGDHQ9H9P8 463 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PALMDQ9NP74 551 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 KCNJ14Q9UNX9 436 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ATP8A1Q9Y2Q0 1164 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 KIF14Q15058 1648 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 SYNJ2O15056 1496 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 HNRNPCP07910 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 SLC4A8Q2Y0W8 1093 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ZMYM6O95789 1325 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 CHL1O00533 1208 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 OGFOD1Q8N543 542 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 IGF2BP3O00425 579 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 EEF1DP29692 281 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PDE4DQ08499 809 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 SLC39A14Q15043 492 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 NLRP7Q8WX94 980 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 CHMP6Q96FZ7 201 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 TXNDC16Q9P2K2 825 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 USP37Q86T82 979 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 DHX40Q8IX18 779 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 NSMCE1Q8WV22 266 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 NUDT16Q96DE0 195 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ELAC2Q9BQ52 826 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 HAUS8Q9BT25 410 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 SRGAP2O75044 1071 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ITIH3Q06033 890 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 TMEM87BQ96K49 555 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ZWINTO95229 277 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 DNM2P50570 870 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PTPROQ16827 1216 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ACBD5Q5T8D3 534 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 AFAP1L2Q8N4X5 818 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 MAGI1Q96QZ7 1491 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 B4E1Z4 1266 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 GNAT2P19087 354 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 PSMC1P62191 440 aaKnown RBP6.64□□□□□ -1.35
VPS13B-203ENST00000358544 TBC1D22AQ8WUA7 517 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 DNAJC9Q8WXX5 260 aa6.64□□□□□ -1.35
VPS13B-203ENST00000358544 ZPR1O75312 459 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 HOXA7P31268 230 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 SLC9C2Q5TAH2 1124 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 G2E3Q7L622 706 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 BBOF1Q8ND07 529 aa6.63□□□□□ -1.35
VPS13B-203ENST00000358544 GFM2Q969S9 779 aaKnown RBP6.63□□□□□ -1.35
VPS13B-203ENST00000358544 PKDREJQ9NTG1 2253 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms