RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OLFM3Q96PB7 478 aa9.59□□□□□ -0.87
COL6A6-201ENST00000358511 DPH5Q9H2P9 285 aa9.59□□□□□ -0.87
COL6A6-201ENST00000358511 SERTAD1Q9UHV2 236 aa9.59□□□□□ -0.87
COL6A6-201ENST00000358511 CHAMP1Q96JM3 812 aa9.59□□□□□ -0.87
COL6A6-201ENST00000358511 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
COL6A6-201ENST00000358511 MCM9Q9NXL9 1143 aa9.59□□□□□ -0.87
COL6A6-201ENST00000358511 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 DCUN1D2Q6PH85 259 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 FGFR1OP2Q9NVK5 253 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 APOEP02649 317 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 C10orf76Q5T2E6 689 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 TRIM42Q8IWZ5 723 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 FGD4Q96M96 766 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 GSDMAQ96QA5 445 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 YIPF3Q9GZM5 350 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 BATF3Q9NR55 127 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 MAPK13O15264 365 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 RASSF7Q02833 373 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 DHX9Q08211 1270 aaKnown RBP9.58□□□□□ -0.88
COL6A6-201ENST00000358511 PIP4K2CQ8TBX8 421 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 HMGB2P26583 209 aaKnown RBP9.58□□□□□ -0.88
COL6A6-201ENST00000358511 ADCY2Q08462 1091 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 RCN2Q14257 317 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 ANKRD7Q92527 254 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 MIS12Q9H081 205 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 MRPL46Q9H2W6 279 aaKnown RBP9.58□□□□□ -0.88
COL6A6-201ENST00000358511 GTPBP6O43824 516 aaPredicted RBP9.58□□□□□ -0.88
COL6A6-201ENST00000358511 PDHA1P08559 390 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 PDE6CP51160 858 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 OTUD7BQ6GQQ9 843 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 CLEC17AQ6ZS10 378 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 BPIFA3Q9BQP9 254 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 CARD14Q9BXL6 1004 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 STOML1Q9UBI4 398 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 GCNT3O95395 438 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 RPN1P04843 607 aaKnown RBP9.58□□□□□ -0.88
COL6A6-201ENST00000358511 CHGBP05060 677 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 MMEP08473 750 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 EIF2AQ9BY44 585 aaKnown RBP9.58□□□□□ -0.88
COL6A6-201ENST00000358511 RANBP1P43487 201 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 ARHGAP18Q8N392 663 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 NT5C3AQ9H0P0 336 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 TADA3O75528 432 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 ABCB4P21439 1286 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 LMNB2Q03252 620 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 AKAP4Q5JQC9 854 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 GRAMD4Q6IC98 578 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 C16orf87Q6PH81 154 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 FNBP1Q96RU3 617 aa9.58□□□□□ -0.88
COL6A6-201ENST00000358511 HERC4Q5GLZ8 1057 aaPredicted RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 NCAPH2Q6IBW4 605 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 DPH6Q7L8W6 267 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 ANKRD35Q8N283 1001 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 CEP70Q8NHQ1 597 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 U2AF1L4Q8WU68 220 aaKnown RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 MAN1A2O60476 641 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 MBD4O95243 580 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 LMNB1P20700 586 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 MIGA1Q8NAN2 632 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 GFM2Q969S9 779 aaKnown RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 HOXB7P09629 217 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 MRPL12P52815 198 aaKnown RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 MYO1EQ12965 1108 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 NEK9Q8TD19 979 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 PBKQ96KB5 322 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 EXOC7Q9UPT5 735 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 ZNF827Q17R98 1081 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 PPWD1Q96BP3 646 aaKnown RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 PAIP2BQ9ULR5 123 aaKnown RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 ACEP12821 1306 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 PPP6R2O75170 966 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 PDCLQ13371 301 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 CTAGE3PQ8IX95 158 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 EFHD1Q9BUP0 239 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 DAAM1Q9Y4D1 1078 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 NDUFA10O95299 355 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 QRICH2Q9H0J4 1663 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 ZBTB22O15209 634 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 KRT3P12035 628 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 TUBGCP2Q9BSJ2 902 aa9.57□□□□□ -0.88
COL6A6-201ENST00000358511 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL6A6-201ENST00000358511 GCFC2P16383 781 aaKnown RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 FBLN1P23142 703 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 KRT24Q2M2I5 525 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 SLC30A9Q6PML9 568 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 PTPN22Q9Y2R2 807 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 SCRN1Q12765 414 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 ACRBPQ8NEB7 543 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 NOC2LQ9Y3T9 749 aaKnown RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 TARSL2A2RTX5 802 aaKnown RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 SNX29Q8TEQ0 813 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 ZMYND12Q9H0C1 365 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 DMRT2Q9Y5R5 561 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms