RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 FPGT-TNNI3KV9GXZ4 949 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 UTYO14607 1347 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 COL1A1P02452 1464 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 BIN1O00499 593 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 AHCYL1O43865 530 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 ITGBL1O95965 494 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 LINGO3P0C6S8 592 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 HSP90AB4PQ58FF6 505 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 SLC30A9Q6PML9 568 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 TOGARAM2Q6ZUX3 1019 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 ATG9AQ7Z3C6 839 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 GDAP1L1Q96MZ0 367 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 RGL1Q9NZL6 768 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 WWC3Q9ULE0 1092 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
SMARCAL1-202ENST00000358207 OPLAHO14841 1288 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 ARHGAP25P42331 645 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 SETDB1Q15047 1291 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 SPRED3Q2MJR0 410 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 CCDC178Q5BJE1 867 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 B4GALNT4Q76KP1 1039 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 ZBTB38Q8NAP3 1195 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 NOA1Q8NC60 698 aaKnown RBP10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 NSMCE1Q8WV22 266 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 ANO10Q9NW15 660 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 TRPC6Q9Y210 931 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 NDUFAB1O14561 156 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 SF3B3Q15393 1217 aaKnown RBP10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 METTL24Q5JXM2 366 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 SP8Q8IXZ3 490 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 PROCA1Q8NCQ7 364 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 TTLL11Q8NHH1 800 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 NUP133Q8WUM0 1156 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 RSRC1Q96IZ7 334 aaKnown RBP10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 SH3GL2Q99962 352 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 GOLPH3LQ9H4A5 285 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 JAG2Q9Y219 1238 aa10.43□□□□□ -0.74
SMARCAL1-202ENST00000358207 A0A0U1RQJ8 604 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 GOLGA6CA6NDK9 693 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 MYO1BO43795 1136 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 BBOX1O75936 387 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 RNF8O76064 485 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 UPP2O95045 317 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 GOLGA6DP0CG33 693 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 PAX3P23760 479 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 COL9A3Q14050 684 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 KIF4BQ2VIQ3 1234 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 ERFEQ4G0M1 354 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 FCHSD1Q86WN1 690 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 CEP57L1Q8IYX8 460 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 FAM81AQ8TBF8 368 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 ATRIPQ8WXE1 791 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 DPF2Q92785 391 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 HOOK2Q96ED9 719 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 NUP58Q9BVL2 599 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 GOLGA6AQ9NYA3 693 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 CDC23Q9UJX2 597 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 MYBL1P10243 752 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 PAPOLAP51003 745 aaKnown RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 CDR1P51861 262 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 RABL6Q3YEC7 729 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 RNF187Q5TA31 235 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 YTHDF3Q7Z739 585 aaKnown RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 MFN1Q8IWA4 741 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 RASSF8Q8NHQ8 419 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 GBP3Q9H0R5 595 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 COPRSQ9NQ92 184 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 ZNF541Q9H0D2 1346 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 PCCAP05165 728 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 SCARF1Q14162 830 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 PLCB4Q15147 1175 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 TRIM42Q8IWZ5 723 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 ATL2Q8NHH9 583 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 STAMBPL1Q96FJ0 436 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 MRPL44Q9H9J2 332 aaKnown RBP10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 HAUS2Q9NVX0 235 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 CEP126Q9P2H0 1117 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 HACL1Q9UJ83 578 aa10.42□□□□□ -0.74
SMARCAL1-202ENST00000358207 EYA2O00167 538 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 GLRX3O76003 335 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 ATP1A3P13637 1013 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 CTSWP56202 376 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 NCAPHQ15003 741 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 CNTROBQ8N137 903 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 ZC3H15Q8WU90 426 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 DESI2Q9BSY9 194 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 ERICH2A1L162 156 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 KIF4AO95239 1232 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 DPCR1Q3MIW9 517 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 ARHGAP22Q7Z5H3 698 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 KIAA0825Q8IV33 1275 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 GPATCH3Q96I76 525 aa10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 MMADHCQ9H3L0 296 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 PAPOLBQ9NRJ5 636 aaKnown RBP10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 CORO1CQ9ULV4 474 aaPredicted RBP10.41□□□□□ -0.74
SMARCAL1-202ENST00000358207 A0A0D9SFI3 127 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms