RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 LOC102724159A0A0B4J2E5 919 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 FSBPO95073 299 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 ZAP70P43403 619 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 PWP2Q15269 919 aaKnown RBP11.93□□□□□ -0.5
CAPN3-205ENST00000357568 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 SPON1Q9HCB6 807 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 AKAP11Q9UKA4 1901 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 GRIN2DO15399 1336 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 CHD4Q14839 1912 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 H7C1D1 291 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 SERPINB2P05120 415 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 MMP10P09238 476 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 PAK1Q13153 545 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 RTN1Q16799 776 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 SPECC1Q5M775 1068 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 EMBQ6PCB8 327 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 GRAMD1CQ8IYS0 662 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 CAPN11Q9UMQ6 739 aa11.93□□□□□ -0.5
CAPN3-205ENST00000357568 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 NTSR2O95665 410 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 PCCAP05165 728 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 XBP1P17861 261 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 HNRNPH1P31943 449 aaKnown RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 INPP5BP32019 993 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 CYLC1P35663 651 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 PLCB4Q15147 1175 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 SUSD4Q5VX71 490 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 MICALCLQ6ZW33 695 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 CRACR2BQ8N4Y2 399 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 CAVIN3Q969G5 261 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 NUP58Q9BVL2 599 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 RNF26Q9BY78 433 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 B4E1Z4 1266 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 GPTP24298 496 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 CCT5P48643 541 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 CCDC57Q2TAC2 916 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 ZNF622Q969S3 477 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN3-205ENST00000357568 JAKMIP2Q96AA8 810 aa11.92□□□□□ -0.5
CAPN3-205ENST00000357568 LGALS16A8MUM7 142 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 KCNJ18B7U540 433 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 MYH8P13535 1937 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 HERVK_113P62684 666 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 ZNF658Q5TYW1 1059 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 BICDL1Q6ZP65 573 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 KAT2BQ92831 832 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 LUC7L2Q9Y383 392 aaKnown RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 ADORA1P30542 326 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 PTGER2P43116 358 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 EPHB4P54760 987 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 DRP2Q13474 957 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 KLHL10Q6JEL2 608 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 CCDC155Q8N6L0 562 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
CAPN3-205ENST00000357568 GUCA1BQ9UMX6 200 aa11.91□□□□□ -0.5
CAPN3-205ENST00000357568 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 A0A087X0B3 334 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 ABL1P00519 1130 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 SCARF1Q14162 830 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 E2F4Q16254 413 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 GLE1Q53GS7 698 aaKnown RBP11.9□□□□□ -0.5
CAPN3-205ENST00000357568 FIGNQ5HY92 759 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 CCDC122Q5T0U0 273 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 CABS1Q96KC9 395 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 THAP9Q9H5L6 903 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 CXorf56Q9H5V9 222 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 C21orf2O43822 256 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
CAPN3-205ENST00000357568 MYL1P05976 194 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 CSF1RP07333 972 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 MAP2K2P36507 400 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 STX17P56962 302 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 KCNV1Q6PIU1 500 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 CNBD1Q8NA66 436 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 ZNF507Q8TCN5 953 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms