RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ANO9A1A5B4 782 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 CFAP73A6NFT4 308 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
RTN3-205ENST00000356000 CLTAP09496 248 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 CCND1P24385 295 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 OTUD7BQ6GQQ9 843 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 KRT27Q7Z3Y8 459 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 CCDC43Q96MW1 224 aaKnown RBP17.48■□□□□ 0.39
RTN3-205ENST00000356000 ZCWPW1Q9H0M4 648 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 MMADHCQ9H3L0 296 aaPredicted RBP17.48■□□□□ 0.39
RTN3-205ENST00000356000 EPN1Q9Y6I3 576 aaPredicted RBP17.48■□□□□ 0.39
RTN3-205ENST00000356000 ABLIM1O14639 778 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 PPP6R2O75170 966 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 BAG6P46379 1132 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 ANKRD27Q96NW4 1050 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 TRIM4Q9C037 500 aa17.48■□□□□ 0.39
RTN3-205ENST00000356000 FAM208AQ9UK61 1670 aaKnown RBP17.47■□□□□ 0.39
RTN3-205ENST00000356000 LRRD1A4D1F6 860 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 GOLGA6L10A6NI86 522 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 NDUFA10O95299 355 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 ERCC5P28715 1186 aaPredicted RBP17.47■□□□□ 0.39
RTN3-205ENST00000356000 ZBED6P86452 979 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 MORC3Q14149 939 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 CCDC178Q5BJE1 867 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 ZNF662Q6ZS27 426 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
RTN3-205ENST00000356000 MAF1Q9H063 256 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 STIM2Q9P246 746 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 SLC12A4Q9UP95 1085 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 GKAP1Q5VSY0 366 aaPredicted RBP17.47■□□□□ 0.39
RTN3-205ENST00000356000 DHX32Q7L7V1 743 aaKnown RBP17.47■□□□□ 0.39
RTN3-205ENST00000356000 MREGQ8N565 214 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 FSD1Q9BTV5 496 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 PIDD1Q9HB75 910 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 SLC12A6Q9UHW9 1150 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 TSPYL4Q9UJ04 414 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
RTN3-205ENST00000356000 CCT8L1PA6NM43 557 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 CYP21A2P08686 494 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 SARSP49591 514 aaKnown RBP17.46■□□□□ 0.39
RTN3-205ENST00000356000 TRIM42Q8IWZ5 723 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 DNAAF2Q9NVR5 837 aaKnown RBP17.46■□□□□ 0.39
RTN3-205ENST00000356000 C2CD2Q9Y426 696 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 FOXN1O15353 648 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 TRIM37O94972 964 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 ALDH3A1P30838 453 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 PLCD1P51178 756 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 ANKRD20A2Q5SQ80 823 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 ANKRD20A1Q5TYW2 823 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 ANKRD20A3Q5VUR7 823 aa17.46■□□□□ 0.39
RTN3-205ENST00000356000 PDIA3P30101 505 aaKnown RBP17.45■□□□□ 0.38
RTN3-205ENST00000356000 MXRA7P84157 204 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 ACBD5Q5T8D3 534 aaPredicted RBP17.45■□□□□ 0.38
RTN3-205ENST00000356000 CREG2Q8IUH2 290 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 TRIML1Q8N9V2 468 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 ZNF274Q96GC6 653 aaPredicted RBP17.45■□□□□ 0.38
RTN3-205ENST00000356000 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 N4BP3O15049 544 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
RTN3-205ENST00000356000 PAEPP09466 180 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 KIF5BP33176 963 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 SLC7A5Q01650 507 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 DBN1Q16643 649 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 CCDC122Q5T0U0 273 aa17.45■□□□□ 0.38
RTN3-205ENST00000356000 COL15A1P39059 1388 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 KIF28PB7ZC32 967 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 UPP2O95045 317 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 OATP04181 439 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 SCNN1BP51168 640 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 SFSWAPQ12872 951 aaKnown RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 PAK2Q13177 524 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 DYNC1I2Q13409 638 aaKnown RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 CCDC97Q96F63 343 aaPredicted RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 PCMTD2Q9NV79 361 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 KCNH3Q9ULD8 1083 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 SPDYE5A6NIY4 337 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 RNF225M0QZC1 329 aaPredicted RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 VAV2P52735 878 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 HERVK_113P62684 666 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 LBRQ14739 615 aaKnown RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 CDKAL1Q5VV42 579 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 HAUS3Q68CZ6 603 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 SPATA4Q8NEY3 305 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 NAF1Q96HR8 494 aaKnown RBP17.44■□□□□ 0.38
RTN3-205ENST00000356000 TMBIM4Q9HC24 238 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 CABP1Q9NZU7 370 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
RTN3-205ENST00000356000 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 IFIT3O14879 490 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms