RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 IDEP14735 1019 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 DRD4P21917 467 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
CCR9-201ENST00000355983 CUL3Q13618 768 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 SPDYCQ5MJ68 293 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
CCR9-201ENST00000355983 ANKS4BQ8N8V4 417 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 B4GALNT2Q8NHY0 566 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 MIPOL1Q8TD10 442 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 CAPZA3Q96KX2 299 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 PHAXQ9H814 394 aaKnown RBP8.54□□□□□ -1.04
CCR9-201ENST00000355983 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 PCDHGA4Q9Y5G9 962 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 NFAT5O94916 1531 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 WASLO00401 505 aaPredicted RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 PRC1O43663 620 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 TACC1O75410 805 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 CD151P48509 253 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 COPB1P53618 953 aaKnown RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 SNX1Q13596 522 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 KRT31Q15323 416 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 TSR1Q2NL82 804 aaKnown RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 CCDC197Q8NCU1 140 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 PLEKHG4BQ96PX9 1271 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 YIPF3Q9GZM5 350 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 LMCD1Q9NZU5 365 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 CPDO75976 1380 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 GRID2IPA4D2P6 1211 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 ZSCAN9O15535 394 aaPredicted RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 FAM163BP0C2L3 166 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 ALDH3A1P30838 453 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 KIF5BP33176 963 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 PAFAH1B1P43034 410 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 ZNF131P52739 623 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 PPP2R2AP63151 447 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 TTF1Q15361 905 aaPredicted RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 PPP1R7Q15435 360 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 C8orf74Q6P047 294 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 KBTBD3Q8NAB2 608 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 AGAP11Q8TF27 550 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 RBM41Q96IZ5 413 aaKnown RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 TRAPPC9Q96Q05 1148 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 EPAS1Q99814 870 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 WDR35Q9P2L0 1181 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 RWDD2AQ9UIY3 292 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 FBXO2Q9UK22 296 aaPredicted RBP8.53□□□□□ -1.04
CCR9-201ENST00000355983 LRRC42Q9Y546 428 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 BCL9O00512 1426 aa8.53□□□□□ -1.04
CCR9-201ENST00000355983 LRRD1A4D1F6 860 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 BHMG1C9JSJ3 638 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 GCOM1H8Y6P7 765 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 N4BP3O15049 544 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 FOXN1O15353 648 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 MYZAPP0CAP1 466 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 GNAT1P11488 350 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 SFSWAPQ12872 951 aaKnown RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 HHATQ5VTY9 493 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 KCTD16Q68DU8 428 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 OTUD7BQ6GQQ9 843 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 DPY19L2Q6NUT2 758 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 NFXL1Q6ZNB6 911 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 ZNF513Q8N8E2 541 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 GBP7Q8N8V2 638 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 HDAC7Q8WUI4 952 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 CCDC8Q9H0W5 538 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 TRIM10Q9UDY6 481 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 LUC7L2Q9Y383 392 aaKnown RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 SRPRBQ9Y5M8 271 aaKnown RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 NWD2Q9ULI1 1742 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 H0YGN5 161 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 BAG3O95817 575 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 PENKP01210 267 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 NQO1P15559 274 aaKnown RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 CTCFP49711 727 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 MTMR3Q13615 1198 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 QPCTQ16769 361 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 LRRC23Q53EV4 343 aaPredicted RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 HSP90AA4PQ58FG1 418 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 PIGWQ7Z7B1 504 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 STK11IPQ8N1F8 1099 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 LZICQ8WZA0 190 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 LRRC45Q96CN5 670 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 CHP1Q99653 195 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 CCDC134Q9H6E4 229 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 PPANQ9NQ55 473 aaKnown RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 TLR7Q9NYK1 1049 aaKnown RBP8.52□□□□□ -1.05
CCR9-201ENST00000355983 NFS1Q9Y697 457 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 CCDC61Q9Y6R9 512 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 AFF2P51816 1311 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 FLT4P35916 1363 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 PTPRUQ92729 1446 aa8.52□□□□□ -1.05
CCR9-201ENST00000355983 MYH7P12883 1935 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms