RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MTF1Q14872 753 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 CCDC155Q8N6L0 562 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 PKD2L1Q9P0L9 805 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 ITPK1Q13572 414 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 KRT79Q5XKE5 535 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 ACRBPQ8NEB7 543 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 SLC39A2Q9NP94 309 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 CPDO75976 1380 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 ILDR1Q86SU0 546 aaPredicted RBP15.63■□□□□ 0.09
SREBF1-202ENST00000355815 CCDC170Q8IYT3 715 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 FERMT2Q96AC1 680 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 RNF26Q9BY78 433 aaPredicted RBP15.63■□□□□ 0.09
SREBF1-202ENST00000355815 SLC24A3Q9HC58 644 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 STK38LQ9Y2H1 464 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 TRAF5O00463 557 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
SREBF1-202ENST00000355815 PTPREP23469 700 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 LRCH2Q5VUJ6 765 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 JAKMIP2Q96AA8 810 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 NLRC4Q9NPP4 1024 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 SAMD15Q9P1V8 674 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 GGA1Q9UJY5 639 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 GNA11P29992 359 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 RESP18Q5W5W9 173 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 FAM84BQ96KN1 310 aaPredicted RBP15.62■□□□□ 0.09
SREBF1-202ENST00000355815 POLD4Q9HCU8 107 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
SREBF1-202ENST00000355815 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 CABP7Q86V35 215 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 CAPS2Q9BXY5 557 aa15.62■□□□□ 0.09
SREBF1-202ENST00000355815 RNF40O75150 1001 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 FGFR1OPO95684 399 aaKnown RBP15.61■□□□□ 0.09
SREBF1-202ENST00000355815 HLA-DOAP06340 250 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 CLTAP09496 248 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 SLC16A2P36021 539 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 BTDP43251 543 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 FMR1Q06787 632 aaKnown RBP eCLIP15.61■□□□□ 0.09
SREBF1-202ENST00000355815 IFT88Q13099 833 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 MORC3Q14149 939 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 PPP1R7Q15435 360 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 TRIM68Q6AZZ1 485 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 LRWD1Q9UFC0 647 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 KCNJ18B7U540 433 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 KCNJ12Q14500 433 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 USH1GQ495M9 461 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 SLC35F6Q8N357 371 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 SLC4A9Q96Q91 983 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 REREQ9P2R6 1566 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 PEAK1Q9H792 1746 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 TMEM110-MUSTN1A8MSY1 372 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 ECM2O94769 699 aaPredicted RBP15.61■□□□□ 0.09
SREBF1-202ENST00000355815 COA7Q96BR5 231 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 MRRFQ96E11 262 aaKnown RBP15.61■□□□□ 0.09
SREBF1-202ENST00000355815 USP21Q9UK80 565 aa15.61■□□□□ 0.09
SREBF1-202ENST00000355815 TRIM49BA6NDI0 452 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 PLCD1P51178 756 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 ZBTB16Q05516 673 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 NONOQ15233 471 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■■■□ 22
SREBF1-202ENST00000355815 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SPATA1Q5VX52 437 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SARM1Q6SZW1 724 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 TOGARAM2Q6ZUX3 1019 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 RABGGTAQ92696 567 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 PAGE5Q96GU1 130 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SRPRBQ9Y5M8 271 aaKnown RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 PPFIA1Q13136 1202 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 CUL4BQ13620 913 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 E4F1Q66K89 784 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 IKBKBO14920 756 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SLFN14P0C7P3 912 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 LRRC41Q15345 812 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 KIAA0825Q8IV33 1275 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 VSTM4Q8IW00 320 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 MARCH10Q8NA82 808 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 UHMK1Q8TAS1 419 aaKnown RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SNX29Q8TEQ0 813 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SAR1BQ9Y6B6 198 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 ARHGAP25P42331 645 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 CCZ1BP86790 482 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 CCZ1P86791 482 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 SH3RF3Q8TEJ3 882 aaPredicted RBP15.6■□□□□ 0.09
SREBF1-202ENST00000355815 STAG1Q8WVM7 1258 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 TAOK3Q9H2K8 898 aa15.6■□□□□ 0.09
SREBF1-202ENST00000355815 CHMP2AO43633 222 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 RPN1P04843 607 aaKnown RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 CDC25BP30305 580 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 DCP1AQ9NPI6 582 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 PSDA5PKW4 1024 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 EIF3CLB5ME19 914 aaKnown RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 TUBB4BP68371 445 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 SV2BQ7L1I2 683 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 EIF3CQ99613 913 aaKnown RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 CDCA7Q9BWT1 371 aaPredicted RBP15.59■□□□□ 0.09
SREBF1-202ENST00000355815 CACNB3P54284 484 aa15.59■□□□□ 0.09
SREBF1-202ENST00000355815 MXRA7P84157 204 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms