RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 A0A1W2PRG0 241 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 CT47A1Q5JQC4 288 aaPredicted RBP19.61■□□□□ 0.73
VPS13B-201ENST00000355155 REXO1Q8N1G1 1221 aaKnown RBP19.61■□□□□ 0.73
VPS13B-201ENST00000355155 TRIML1Q8N9V2 468 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 GMPSP49915 693 aaPredicted RBP19.6■□□□□ 0.73
VPS13B-201ENST00000355155 E2F4Q16254 413 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 TPRNQ4KMQ1 711 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 SPON1Q9HCB6 807 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 EDIL3O43854 480 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 BMP3P12645 472 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 SEMA3FQ13275 785 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 CCDC96Q2M329 555 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 NEK8Q86SG6 692 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 PIBF1Q8WXW3 757 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 AK8Q96MA6 479 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 NAP1L4Q99733 375 aaKnown RBP19.6■□□□□ 0.73
VPS13B-201ENST00000355155 TMEM39BQ9GZU3 492 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 SH2D4AQ9H788 454 aa19.6■□□□□ 0.73
VPS13B-201ENST00000355155 ZNF165P49910 485 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 TRAF1Q13077 416 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 CCSER1Q9C0I3 900 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 SLFN14P0C7P3 912 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 PPP4R3AQ6IN85 833 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 C11orf57Q6ZUT1 292 aaPredicted RBP19.59■□□□□ 0.73
VPS13B-201ENST00000355155 KCTD1Q719H9 257 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 NAT10Q9H0A0 1025 aaKnown RBP19.59■□□□□ 0.73
VPS13B-201ENST00000355155 GOPCQ9HD26 462 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 ZNF112Q9UJU3 913 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 PPP2R3BQ9Y5P8 575 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 PHIPQ8WWQ0 1821 aa19.59■□□□□ 0.73
VPS13B-201ENST00000355155 PARP14Q460N5 1801 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 QRICH1Q2TAL8 776 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 SYDE2Q5VT97 1194 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 MOXD1Q6UVY6 613 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 HOMER1Q86YM7 354 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 CNNM3Q8NE01 707 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 RASGRP4Q8TDF6 673 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 MBOAT7Q96N66 472 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 DEFB129Q9H1M3 183 aa19.58■□□□□ 0.73
VPS13B-201ENST00000355155 MRPL12P52815 198 aaKnown RBP19.58■□□□□ 0.72
VPS13B-201ENST00000355155 DHX40Q8IX18 779 aaKnown RBP19.58■□□□□ 0.72
VPS13B-201ENST00000355155 MICALL2Q8IY33 904 aa19.58■□□□□ 0.72
VPS13B-201ENST00000355155 SYMPKQ92797 1274 aaKnown RBP19.58■□□□□ 0.72
VPS13B-201ENST00000355155 CUL5Q93034 780 aa19.58■□□□□ 0.72
VPS13B-201ENST00000355155 DNAJC25Q9H1X3 360 aa19.58■□□□□ 0.72
VPS13B-201ENST00000355155 ZNF541Q9H0D2 1346 aa19.58■□□□□ 0.72
VPS13B-201ENST00000355155 SLC26A4O43511 780 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 ASNSP08243 561 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 INF2Q27J81 1249 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 CEP57L1Q8IYX8 460 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 CRYGNQ8WXF5 182 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 VCPKMTQ9H867 229 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 VEZTQ9HBM0 779 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 CNOT7Q9UIV1 285 aaKnown RBP19.57■□□□□ 0.72
VPS13B-201ENST00000355155 SHTN1A0MZ66 631 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 RASA3Q14644 834 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 CDC37Q16543 378 aaPredicted RBP19.57■□□□□ 0.72
VPS13B-201ENST00000355155 COA7Q96BR5 231 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 MTMR9Q96QG7 549 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 VAT1LQ9HCJ6 419 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 MTMR7Q9Y216 660 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 A0A087X0B3 334 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 PSDA5PKW4 1024 aaPredicted RBP19.57■□□□□ 0.72
VPS13B-201ENST00000355155 MYH7BA7E2Y1 1941 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 IKBKBO14920 756 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 POLR2DO15514 142 aaKnown RBP19.57■□□□□ 0.72
VPS13B-201ENST00000355155 LMNB1P20700 586 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 MCM7P33993 719 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 AP3B2Q13367 1082 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 POSTNQ15063 836 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 GPC2Q8N158 579 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 CCDC34Q96HJ3 373 aa19.57■□□□□ 0.72
VPS13B-201ENST00000355155 CYP3A7-CYP3A51PA0A087WV96 503 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 GCFC2P16383 781 aaKnown RBP19.56■□□□□ 0.72
VPS13B-201ENST00000355155 CYP3A7P24462 503 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 CDC25BP30305 580 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 USP49Q70CQ1 688 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.56■□□□□ 0.72
VPS13B-201ENST00000355155 FAM160B2Q86V87 743 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 HOOK2Q96ED9 719 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 SERTAD1Q9UHV2 236 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 RBBP6Q7Z6E9 1792 aaKnown RBP19.56■□□□□ 0.72
VPS13B-201ENST00000355155 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 PIK3CDO00329 1044 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 AP5Z1O43299 807 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
VPS13B-201ENST00000355155 TMEM60Q9H2L4 133 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 RANBP17Q9H2T7 1088 aaKnown RBP19.56■□□□□ 0.72
VPS13B-201ENST00000355155 MAGEF1Q9HAY2 307 aa19.56■□□□□ 0.72
VPS13B-201ENST00000355155 CTNND1O60716 968 aaKnown RBP19.55■□□□□ 0.72
VPS13B-201ENST00000355155 KIF4BQ2VIQ3 1234 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 PDXDC2PQ6P474 469 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 PLA2G4DQ86XP0 818 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 TBCKQ8TEA7 893 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 AMNQ9BXJ7 453 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 OR52Z1P0C646 297 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 FXR2P51116 673 aaKnown RBP eCLIP19.55■□□□□ 0.727e-6■■■■□ 23.7
VPS13B-201ENST00000355155 ATP2B2Q01814 1243 aa19.55■□□□□ 0.72
VPS13B-201ENST00000355155 MORC3Q14149 939 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms