RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 RESTQ13127 1097 aa23.15■■□□□ 1.3
SIGMAR1-202ENST00000353468 MOGSQ13724 837 aa23.15■■□□□ 1.3
SIGMAR1-202ENST00000353468 COG2Q14746 738 aa23.15■■□□□ 1.3
SIGMAR1-202ENST00000353468 SPRYD7Q5W111 196 aa23.15■■□□□ 1.3
SIGMAR1-202ENST00000353468 FBXO11Q86XK2 927 aa23.15■■□□□ 1.3
SIGMAR1-202ENST00000353468 AMNQ9BXJ7 453 aa23.15■■□□□ 1.3
SIGMAR1-202ENST00000353468 ZBTB48P10074 688 aaPredicted RBP23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 FDX1P10109 184 aa23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 CALML3P27482 149 aa23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 HOXA7P31268 230 aaPredicted RBP23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 DSG3P32926 999 aa23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 GTF2A2P52657 109 aa23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 DIS3L2Q8IYB7 885 aaKnown RBP23.14■■□□□ 1.3
SIGMAR1-202ENST00000353468 LOC285556D6RIA3 1793 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 MKRN3Q13064 507 aaKnown RBP23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 ZMYND12Q9H0C1 365 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 BRMS1Q9HCU9 246 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 HOXC10Q9NYD6 342 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 AGTPBP1Q9UPW5 1226 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 PCDHA1Q9Y5I3 950 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 ATP6V1DQ9Y5K8 247 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 TLL2Q9Y6L7 1015 aa23.14■■□□□ 1.29
SIGMAR1-202ENST00000353468 BTBD18B2RXH4 712 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 KRT2P35908 639 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 ZNF157P51786 506 aaPredicted RBP23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 GNL2Q13823 731 aaKnown RBP23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 NPY5RQ15761 445 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 GALNT17Q6IS24 598 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 PPP1R18Q6NYC8 613 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 ATG4CQ96DT6 458 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 MS4A4AQ96JQ5 239 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 FOXP1Q9H334 677 aaPredicted RBP23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 SLC38A10Q9HBR0 1119 aa23.13■■□□□ 1.29
SIGMAR1-202ENST00000353468 SMCO2A6NFE2 343 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 KIF28PB7ZC32 967 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 ZBED4O75132 1171 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 CETPP11597 493 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 U2AF2P26368 475 aaKnown RBP eCLIP23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 TRAF1Q13077 416 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 RGMBQ6NW40 437 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 MYPNQ86TC9 1320 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 C6orf50Q9HD87 102 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 PCDHA4Q9UN74 947 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 ADAMTS5Q9UNA0 930 aa23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 CTDP1Q9Y5B0 961 aaPredicted RBP23.12■■□□□ 1.29
SIGMAR1-202ENST00000353468 PARP14Q460N5 1801 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 ESYT2A0FGR8 921 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 VWA5AO00534 786 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 GNA11P29992 359 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 FOXD4L6Q3SYB3 417 aaPredicted RBP23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 USH1GQ495M9 461 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 GPAT2Q6NUI2 795 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 FOXD4L3Q6VB84 417 aaPredicted RBP23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 DAGLBQ8NCG7 672 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 OXER1Q8TDS5 423 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 RLFQ13129 1914 aa23.11■■□□□ 1.29
SIGMAR1-202ENST00000353468 NR5A1Q13285 461 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 PABPC4Q13310 644 aaKnown RBP eCLIP23.1■■□□□ 1.293e-7■■■□□ 14.6
SIGMAR1-202ENST00000353468 BRAPQ7Z569 592 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 RASAL3Q86YV0 1011 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 BLIDQ8IZY5 108 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 ZNF536O15090 1300 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 CCL15-CCL14A0A0B4J2E2 113 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 SPDYE16A6NNV3 312 aaPredicted RBP23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 ICAM1P05362 532 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 IRX3P78415 501 aaPredicted RBP23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 CCL15Q16663 113 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 FAM173BQ6P4H8 233 aa23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 ABT1Q9ULW3 272 aaKnown RBP23.1■■□□□ 1.29
SIGMAR1-202ENST00000353468 ADAMTS3O15072 1205 aa23.09■■□□□ 1.29
SIGMAR1-202ENST00000353468 CLEC17AQ6ZS10 378 aa23.09■■□□□ 1.29
SIGMAR1-202ENST00000353468 CPXCR1Q8N123 301 aa23.09■■□□□ 1.29
SIGMAR1-202ENST00000353468 RAVER2Q9HCJ3 691 aaKnown RBP23.09■■□□□ 1.29
SIGMAR1-202ENST00000353468 BAG4O95429 457 aaKnown RBP23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 TAL1P17542 331 aaPredicted RBP23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 OSBPP22059 807 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 ADCY7P51828 1080 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 NOSTRINQ8IVI9 506 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 REPS2Q8NFH8 660 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 BICD2Q8TD16 824 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 BRI3BPQ8WY22 251 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 CHAMP1Q96JM3 812 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 AGBL1Q96MI9 1066 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 P2RX7Q99572 595 aaKnown RBP23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 ASCC2Q9H1I8 757 aaPredicted RBP23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 RIC8AQ9NPQ8 531 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 PNMA2Q9UL42 364 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 CCPG1Q9ULG6 757 aa23.08■■□□□ 1.29
SIGMAR1-202ENST00000353468 CUL5Q93034 780 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 TNFRSF25Q93038 417 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 GLT8D2Q9H1C3 349 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 PSTPIP2Q9H939 334 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 SMCHD1A6NHR9 2005 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 ABCB11O95342 1321 aa23.07■■□□□ 1.28
SIGMAR1-202ENST00000353468 BTBD19C9JJ37 291 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 M0R2N6 131 aa23.06■■□□□ 1.28
SIGMAR1-202ENST00000353468 SLC10A3P09131 477 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms