RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 DKC1O60832 514 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 RFX6Q8HWS3 928 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 USH1CQ9Y6N9 552 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SPECC1L-ADORA2AF8WAN1 911 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SGK1O00141 431 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 ZNF202O95125 648 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 TMEM191BP0C7N4 346 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 RLBP1P12271 317 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 FANCCQ00597 558 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 GNPTABQ3T906 1256 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SLC39A2Q9NP94 309 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SUFUQ9UMX1 484 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 USP17L12C9JPN9 530 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 USP17L21D6R901 530 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 POC1B-GALNT4F8VUJ3 575 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 MAST3O60307 1309 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 POSTNQ15063 836 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 CACNA2D3Q8IZS8 1091 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 CCNYQ8ND76 341 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 POLR3EQ9NVU0 708 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 MEIS1O00470 390 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 SEC24BO95487 1268 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 S100BP04271 92 aaPredicted RBP10.96□□□□□ -0.65
COL11A1-201ENST00000353414 POLR2MP0CAP2 368 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 GOLGA8FQ08AF8 430 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 GOLGA8DPQ0D2H9 430 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 METTL22Q9BUU2 404 aaPredicted RBP10.96□□□□□ -0.65
COL11A1-201ENST00000353414 TMEM232C9JQI7 657 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 OPHN1O60890 802 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 ATP2A3Q93084 1043 aa10.96□□□□□ -0.65
COL11A1-201ENST00000353414 EYA2O00167 538 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 SLC9A5Q14940 896 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 CDC37L1Q7L3B6 337 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 TPX2Q9ULW0 747 aaKnown RBP10.96□□□□□ -0.66
COL11A1-201ENST00000353414 NDUFAB1O14561 156 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 THAP12O43422 761 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 BTDP43251 543 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 ATP1A2P50993 1020 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 RPS6KA1Q15418 735 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 CCDC157Q569K6 752 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 PLEKHM2Q8IWE5 1019 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 IFT20Q8IY31 132 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 REXO1Q8N1G1 1221 aaKnown RBP10.96□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF668Q96K58 619 aaPredicted RBP10.96□□□□□ -0.66
COL11A1-201ENST00000353414 NCAPGQ9BPX3 1015 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 INO80B-WBP1J3KQ70 363 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 ARMCX5Q6P1M9 558 aa10.96□□□□□ -0.66
COL11A1-201ENST00000353414 INO80BQ9C086 356 aaPredicted RBP10.96□□□□□ -0.66
COL11A1-201ENST00000353414 YTHDC2Q9H6S0 1430 aaKnown RBP10.95□□□□□ -0.66
COL11A1-201ENST00000353414 A6NJR5 290 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 GADD45BO75293 160 aaPredicted RBP10.95□□□□□ -0.66
COL11A1-201ENST00000353414 SRGAP2CP0DJJ0 459 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 PSMD2Q13200 908 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 XAB2Q9HCS7 855 aaKnown RBP10.95□□□□□ -0.66
COL11A1-201ENST00000353414 KRT3P12035 628 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 MAGEA1P43355 309 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 FAM149B1Q96BN6 582 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 PLCB1Q9NQ66 1216 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 ANKRD36BQ8N2N9 1353 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 MYBP10242 640 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 IQCB1Q15051 598 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 ZCWPW1Q9H0M4 648 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 GOLGA8SH3BPF8 625 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
COL11A1-201ENST00000353414 SERPINB6P35237 376 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 PPARAQ07869 468 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 RCN2Q14257 317 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 TAOK1Q7L7X3 1001 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 CFAP36Q96G28 342 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 PCDHA12Q9UN75 941 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 PDCD6IPQ8WUM4 868 aaKnown RBP10.95□□□□□ -0.66
COL11A1-201ENST00000353414 RAB3IPQ96QF0 476 aaPredicted RBP10.95□□□□□ -0.66
COL11A1-201ENST00000353414 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 NSD2O96028 1365 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 TTC41PQ6P2S7 1318 aa10.95□□□□□ -0.66
COL11A1-201ENST00000353414 TYW5A2RUC4 315 aaKnown RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 FGD4Q96M96 766 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 DESI2Q9BSY9 194 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 SUGT1Q9Y2Z0 365 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 ELF2Q15723 593 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 C1orf228Q6PIY5 440 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 SEPT8Q92599 483 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 NXF1Q9UBU9 619 aaKnown RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF18P17022 549 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 ZSCAN20P17040 1043 aaPredicted RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 PDE6CP51160 858 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 POLR2FP61218 127 aaKnown RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 COG7P83436 770 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 MAP7Q14244 749 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 CDO1Q16878 200 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 FBXO11Q86XK2 927 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms