RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 PARP1P09874 1014 aaKnown RBP26.78■■□□□ 1.88
USP25-203ENST00000351097 RBM5P52756 815 aaKnown RBP eCLIP26.78■■□□□ 1.88
USP25-203ENST00000351097 TYW1BQ6NUM6 668 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 FBXO38Q6PIJ6 1188 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 USP17L2Q6R6M4 530 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 EPSTI1Q96J88 318 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 A0A087X0B3 334 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 SH3RF1Q7Z6J0 888 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 SPZ1Q9BXG8 430 aa26.78■■□□□ 1.88
USP25-203ENST00000351097 GTPBP4Q9BZE4 634 aaKnown RBP26.78■■□□□ 1.88
USP25-203ENST00000351097 SAMSN1Q9NSI8 373 aaKnown RBP26.78■■□□□ 1.88
USP25-203ENST00000351097 STX10O60499 249 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 KCNA3P22001 575 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 SLC16A10Q8TF71 515 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 SYMPKQ92797 1274 aaKnown RBP26.77■■□□□ 1.88
USP25-203ENST00000351097 IDI2Q9BXS1 227 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 CPVLQ9H3G5 476 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 PPP2R2CQ9Y2T4 447 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 CALML3P27482 149 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 WWC2Q6AWC2 1192 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 TC2NQ8N9U0 490 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 EHD4Q9H223 541 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 PRDM4Q9UKN5 801 aa26.77■■□□□ 1.88
USP25-203ENST00000351097 PAGE5Q96GU1 130 aa26.76■■□□□ 1.87
USP25-203ENST00000351097 FAM198AQ9UFP1 575 aa26.76■■□□□ 1.87
USP25-203ENST00000351097 GOLGA6L9A6NEM1 432 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 SLURP2P0DP57 97 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 DPEP1P16444 411 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 NR1I3Q14994 352 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 GRIPAP1Q4V328 841 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 PIK3AP1Q6ZUJ8 805 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 CLEC10AQ8IUN9 316 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 BLIDQ8IZY5 108 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 PCDHA4Q9UN74 947 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 USP17L5A8MUK1 530 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 AFMP43652 599 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 TCP10Q12799 353 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 TTC38Q5R3I4 469 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 DNAJC18Q9H819 358 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 BARHL2Q9NY43 387 aa26.75■■□□□ 1.87
USP25-203ENST00000351097 A0A1B0GTH6 734 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 EIF6P56537 245 aaKnown RBP26.74■■□□□ 1.87
USP25-203ENST00000351097 ERCC6LQ2NKX8 1250 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 HEATR3Q7Z4Q2 680 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 RTKN2Q8IZC4 609 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 SRRTQ9BXP5 876 aaKnown RBP26.74■■□□□ 1.87
USP25-203ENST00000351097 VWA3AA6NCI4 1184 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 STXBP3O00186 592 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 PDHBP11177 359 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 ZNF174Q15697 407 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 SPATA1Q5VX52 437 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 LRRC47Q8N1G4 583 aaKnown RBP26.74■■□□□ 1.87
USP25-203ENST00000351097 LRRN4CLQ8ND94 238 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 PSMD1Q99460 953 aa26.74■■□□□ 1.87
USP25-203ENST00000351097 DHX36Q9H2U1 1008 aaKnown RBP26.74■■□□□ 1.87
USP25-203ENST00000351097 DDTLA6NHG4 134 aaPredicted RBP26.73■■□□□ 1.87
USP25-203ENST00000351097 SMARCA1P28370 1054 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 TRAPPC10P48553 1259 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 GSDMAQ96QA5 445 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 M0R2N6 131 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 ADKP55263 362 aaKnown RBP26.73■■□□□ 1.87
USP25-203ENST00000351097 ATP2C1P98194 919 aaPredicted RBP26.73■■□□□ 1.87
USP25-203ENST00000351097 DPYDQ12882 1025 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 SH3BP5LQ7L8J4 393 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 CCDC148Q8NFR7 591 aa26.73■■□□□ 1.87
USP25-203ENST00000351097 SYNRGQ9UMZ2 1314 aa26.72■■□□□ 1.87
USP25-203ENST00000351097 MYH8P13535 1937 aa26.72■■□□□ 1.87
USP25-203ENST00000351097 NPM3O75607 178 aaKnown RBP26.72■■□□□ 1.87
USP25-203ENST00000351097 TTLL1O95922 423 aa26.72■■□□□ 1.87
USP25-203ENST00000351097 CUL4BQ13620 913 aa26.72■■□□□ 1.87
USP25-203ENST00000351097 FANCGO15287 622 aa26.71■■□□□ 1.87
USP25-203ENST00000351097 SNHG28P0DPA3 235 aa26.71■■□□□ 1.87
USP25-203ENST00000351097 H2AFXP16104 143 aaPredicted RBP26.71■■□□□ 1.87
USP25-203ENST00000351097 DAGLBQ8NCG7 672 aa26.71■■□□□ 1.87
USP25-203ENST00000351097 CD44P16070 742 aaKnown RBP26.71■■□□□ 1.87
USP25-203ENST00000351097 PTGDRQ13258 359 aa26.71■■□□□ 1.87
USP25-203ENST00000351097 SIPA1L1O43166 1804 aa26.7■■□□□ 1.87
USP25-203ENST00000351097 URI1O94763 535 aaPredicted RBP26.7■■□□□ 1.87
USP25-203ENST00000351097 KLHL10Q6JEL2 608 aa26.7■■□□□ 1.87
USP25-203ENST00000351097 APTXQ7Z2E3 356 aaKnown RBP26.7■■□□□ 1.87
USP25-203ENST00000351097 FAM177A1Q8N128 213 aaPredicted RBP26.7■■□□□ 1.87
USP25-203ENST00000351097 RASGRP4Q8TDF6 673 aa26.7■■□□□ 1.87
USP25-203ENST00000351097 TDRD3Q9H7E2 651 aaKnown RBP26.7■■□□□ 1.87
USP25-203ENST00000351097 PI4KBQ9UBF8 816 aa26.7■■□□□ 1.87
USP25-203ENST00000351097 FRMPD2Q68DX3 1309 aaPredicted RBP26.7■■□□□ 1.86
USP25-203ENST00000351097 GALNT17Q6IS24 598 aa26.7■■□□□ 1.86
USP25-203ENST00000351097 TOGARAM2Q6ZUX3 1019 aa26.7■■□□□ 1.86
USP25-203ENST00000351097 RRP36Q96EU6 259 aaKnown RBP26.7■■□□□ 1.86
USP25-203ENST00000351097 PKNOX2Q96KN3 472 aa26.7■■□□□ 1.86
USP25-203ENST00000351097 UBA5Q9GZZ9 404 aa26.7■■□□□ 1.86
USP25-203ENST00000351097 FAM196BA6NMK8 535 aa26.69■■□□□ 1.86
USP25-203ENST00000351097 MPHOSPH10O00566 681 aaKnown RBP26.69■■□□□ 1.86
USP25-203ENST00000351097 CASP1P29466 404 aa26.69■■□□□ 1.86
USP25-203ENST00000351097 KRT222Q8N1A0 295 aa26.69■■□□□ 1.86
USP25-203ENST00000351097 PRMT6Q96LA8 375 aaPredicted RBP26.69■■□□□ 1.86
USP25-203ENST00000351097 CCDC17Q96LX7 622 aa26.69■■□□□ 1.86
USP25-203ENST00000351097 RIOX1Q9H6W3 641 aa26.69■■□□□ 1.86
USP25-203ENST00000351097 ZNF277Q9NRM2 450 aaPredicted RBP26.69■■□□□ 1.86
USP25-203ENST00000351097 PCDHA6Q9UN73 950 aa26.69■■□□□ 1.86
USP25-203ENST00000351097 PCDHA8Q9Y5H6 950 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms