RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GPCPD1Q9NPB8 672 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 PNMA6FA0A0J9YX94 578 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
SAMM50-201ENST00000350028 AOC3Q16853 763 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 SPATA1Q5VX52 437 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 ZFPM1Q8IX07 1006 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 REXO1Q8N1G1 1221 aaKnown RBP18.9■□□□□ 0.62
SAMM50-201ENST00000350028 SLC16A10Q8TF71 515 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 AK8Q96MA6 479 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 KCND1Q9NSA2 647 aa18.9■□□□□ 0.62
SAMM50-201ENST00000350028 OR52Z1P0C646 297 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 SFPQP23246 707 aaKnown RBP eCLIP18.89■□□□□ 0.61
SAMM50-201ENST00000350028 UBA7P41226 1012 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 STAT6P42226 847 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 ADCY7P51828 1080 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 CUL4BQ13620 913 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 VSTM4Q8IW00 320 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 DISC1Q9NRI5 854 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 RMND1Q9NWS8 449 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 FAM198AQ9UFP1 575 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 MYH4Q9Y623 1939 aa18.89■□□□□ 0.61
SAMM50-201ENST00000350028 CASP1P29466 404 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 SEMA3FQ13275 785 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 LETM2Q2VYF4 491 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 RRAGBQ5VZM2 374 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 CLEC10AQ8IUN9 316 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 MKL1Q969V6 931 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 MED15Q96RN5 788 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 TRIM34Q9BYJ4 488 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 JMJD4Q9H9V9 463 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 SIPA1L1O43166 1804 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 UQCRHLA0A096LP55 91 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 DDTLA6NHG4 134 aaPredicted RBP18.88■□□□□ 0.61
SAMM50-201ENST00000350028 PPP1R3GB7ZBB8 358 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 CCNT1O60563 726 aaKnown RBP18.88■□□□□ 0.61
SAMM50-201ENST00000350028 MYL1P05976 194 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 UQCRHP07919 91 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 TCP10Q12799 353 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 TPD52L1Q16890 204 aaPredicted RBP18.88■□□□□ 0.61
SAMM50-201ENST00000350028 CERKLQ49MI3 558 aaPredicted RBP18.88■□□□□ 0.61
SAMM50-201ENST00000350028 ARMCX5Q6P1M9 558 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 TRMT44Q8IYL2 757 aaKnown RBP18.88■□□□□ 0.61
SAMM50-201ENST00000350028 ADGRF4Q8IZF3 695 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 MYRIPQ8NFW9 859 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 TBCKQ8TEA7 893 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 COA7Q96BR5 231 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 CUEDC2Q9H467 287 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 KANSL2Q9H9L4 492 aa18.88■□□□□ 0.61
SAMM50-201ENST00000350028 BIN2Q9UBW5 565 aaPredicted RBP18.88■□□□□ 0.61
SAMM50-201ENST00000350028 ENTPD3O75355 529 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 CD44P16070 742 aaKnown RBP18.87■□□□□ 0.61
SAMM50-201ENST00000350028 KCNJ6P48051 423 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 ATP2B2Q01814 1243 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 KARSQ15046 597 aaKnown RBP18.87■□□□□ 0.61
SAMM50-201ENST00000350028 CCDC96Q2M329 555 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 JAKMIP3Q5VZ66 844 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 TATDN1Q6P1N9 297 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 ZSCAN29Q8IWY8 852 aaPredicted RBP18.87■□□□□ 0.61
SAMM50-201ENST00000350028 STAMQ92783 540 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 MTRQ99707 1265 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 MAGEF1Q9HAY2 307 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
SAMM50-201ENST00000350028 PCDHAC2Q9Y5I4 1007 aa18.87■□□□□ 0.61
SAMM50-201ENST00000350028 PPIP5K2O43314 1243 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 CACNB3P54284 484 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 SH3BP5LQ7L8J4 393 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 DCAF4Q8WV16 495 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 MTMR8Q96EF0 704 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 RIC8AQ9NPQ8 531 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 RPN1P04843 607 aaKnown RBP18.86■□□□□ 0.61
SAMM50-201ENST00000350028 CDC25AP30304 524 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 ZNF658Q5TYW1 1059 aaPredicted RBP18.86■□□□□ 0.61
SAMM50-201ENST00000350028 TTBK2Q6IQ55 1244 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 CCDC112Q8NEF3 446 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 RASSF8Q8NHQ8 419 aa18.86■□□□□ 0.61
SAMM50-201ENST00000350028 SAMSN1Q9NSI8 373 aaKnown RBP18.86■□□□□ 0.61
SAMM50-201ENST00000350028 DYNC1I1O14576 645 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 ZBTB5O15062 677 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 COL2A1P02458 1487 aaPredicted RBP18.85■□□□□ 0.61
SAMM50-201ENST00000350028 KLHL10Q6JEL2 608 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 TMEM179Q6ZVK1 233 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 CABP7Q86V35 215 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 SGIP1Q9BQI5 828 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 INTS13Q9NVM9 706 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 TMEM260Q9NX78 707 aa18.85■□□□□ 0.61
SAMM50-201ENST00000350028 ATRNL1Q5VV63 1379 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 TMEM232C9JQI7 657 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 C21orf2O43822 256 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
SAMM50-201ENST00000350028 TNNT1P13805 278 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 MRPL12P52815 198 aaKnown RBP18.84■□□□□ 0.61
SAMM50-201ENST00000350028 KCNB1Q14721 858 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 NAALADL2Q58DX5 795 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 MTFR1LQ9H019 292 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 GLT8D2Q9H1C3 349 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms