RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CCDC196A0A1B0GTZ2 297 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 SYF2O95926 243 aaKnown RBP17.81■□□□□ 0.44
HMGA1-202ENST00000347617 TDO2P48775 406 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 HSP90AA4PQ58FG1 418 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 ILDR2Q71H61 639 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CCDC91Q7Z6B0 441 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 TBC1D10CQ8IV04 446 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 DIS3L2Q8IYB7 885 aaKnown RBP17.81■□□□□ 0.44
HMGA1-202ENST00000347617 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 LY9Q9HBG7 655 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
HMGA1-202ENST00000347617 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 RANBP6O60518 1105 aaKnown RBP17.8■□□□□ 0.44
HMGA1-202ENST00000347617 DEXIO95424 95 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 LDHCP07864 332 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 TOB1P50616 345 aaPredicted RBP17.8■□□□□ 0.44
HMGA1-202ENST00000347617 MFSD6Q6ZSS7 791 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 RAB11FIP4Q86YS3 637 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 MIGA1Q8NAN2 632 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 FAM76AQ8TAV0 307 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 PHKBQ93100 1093 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 FERMT2Q96AC1 680 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 SLC26A6Q9BXS9 759 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 LTBP1Q14766 1721 aa17.8■□□□□ 0.44
HMGA1-202ENST00000347617 PRKAB2O43741 272 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 LDHBP07195 334 aaKnown RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 PAPD7Q5XG87 772 aaKnown RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 STYK1Q6J9G0 422 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 FOXR1Q6PIV2 292 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 RPAINQ86UA6 219 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 MICU3Q86XE3 530 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 SPATS2Q86XZ4 545 aaKnown RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 TBC1D22AQ8WUA7 517 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 FAM217BQ9NTX9 383 aaPredicted RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 SLC12A7Q9Y666 1083 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 ANO9A1A5B4 782 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 FGRP09769 529 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 PPP4CP60510 307 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 PPFIA1Q13136 1202 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 TMTC2Q8N394 836 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 NOA1Q8NC60 698 aaKnown RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 CPLX3Q8WVH0 158 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
HMGA1-202ENST00000347617 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 POLLQ9UGP5 575 aa17.79■□□□□ 0.44
HMGA1-202ENST00000347617 FAM205AQ6ZU69 1335 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 EBAG9O00559 213 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
HMGA1-202ENST00000347617 KRT83P78385 493 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
HMGA1-202ENST00000347617 PPARAQ07869 468 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 SBK1Q52WX2 424 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 ACRBPQ8NEB7 543 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 COA1Q9GZY4 146 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 RWDD2AQ9UIY3 292 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 SUGT1Q9Y2Z0 365 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 SAR1BQ9Y6B6 198 aa17.78■□□□□ 0.44
HMGA1-202ENST00000347617 BTBD18B2RXH4 712 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 PPP1R3GB7ZBB8 358 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 GOLGA8KD6RF30 607 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 CLSTN1O94985 981 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 PRDX5P30044 214 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 BAG6P46379 1132 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 ERVK-24P63145 666 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 DPYDQ12882 1025 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 SEMA3FQ13275 785 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 DZIP1Q86YF9 867 aaKnown RBP17.77■□□□□ 0.44
HMGA1-202ENST00000347617 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
HMGA1-202ENST00000347617 EPN1Q9Y6I3 576 aaPredicted RBP17.77■□□□□ 0.44
HMGA1-202ENST00000347617 MYH2Q9UKX2 1941 aa17.77■□□□□ 0.44
HMGA1-202ENST00000347617 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 N4BP3O15049 544 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 XBP1P17861 261 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 AKAP17AQ02040 695 aaKnown RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 ITIH3Q06033 890 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 TSR1Q2NL82 804 aaKnown RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 SLF2Q8IX21 1173 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 AMOTL1Q8IY63 956 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 PAGE5Q96GU1 130 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 NUP88Q99567 741 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 TACO1Q9BSH4 297 aaKnown RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
HMGA1-202ENST00000347617 A0A1W2PQC6 194 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 TRIM75PA6NK02 468 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 OPA1O60313 960 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 PHACTR2O75167 634 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 ERLIN2O94905 339 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 NDUFA10O95299 355 aa17.76■□□□□ 0.43
HMGA1-202ENST00000347617 BAG3O95817 575 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms