RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NAP1L5Q96NT1 182 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 XPO4Q9C0E2 1151 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 NYAP2Q9P242 653 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PSMD14O00487 310 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 DPYDQ12882 1025 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SEPT2Q15019 361 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 JAKMIP3Q5VZ66 844 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 DACH1Q9UI36 760 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 RAD21O60216 631 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 GDF11O95390 407 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TXLNAP40222 546 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ADCY7P51828 1080 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 PDXDC2PQ6P474 469 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TBCKQ8TEA7 893 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 STAMQ92783 540 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 FANCLQ9NW38 375 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 COL4A5P29400 1685 aa16.01■□□□□ 0.15
CDK5RAP1-202ENST00000346416 USP17L10C9JJH3 530 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 PRPHP41219 470 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 FANCCQ00597 558 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ABCB5Q2M3G0 1257 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SIAH1Q8IUQ4 282 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 GSDMAQ96QA5 445 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CSRNP1Q96S65 589 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 GMLQ99445 158 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ZBTB5O15062 677 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SLC1A4P43007 532 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ICA1Q05084 483 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 KARSQ15046 597 aaKnown RBP16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TMOD2Q9NZR1 351 aa16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
CDK5RAP1-202ENST00000346416 PP2D1A8MPX8 630 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 NEMFO60524 1076 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SLFN13Q68D06 897 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 PPP1R18Q6NYC8 613 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 OGFOD1Q8N543 542 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 MTMR8Q96EF0 704 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 MTRQ99707 1265 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 DISC1Q9NRI5 854 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SPTLC3Q9NUV7 552 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 HDAC9Q9UKV0 1011 aa15.99■□□□□ 0.15
CDK5RAP1-202ENST00000346416 COL2A1P02458 1487 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CLRN2A0PK11 232 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TCP10L2B9ZVM9 353 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 OR52Z1P0C646 297 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ARID5BQ14865 1188 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 DLGAP5Q15398 846 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 LRRC8AQ8IWT6 810 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ENOX1Q8TC92 643 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 DCAF4Q8WV16 495 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 MYO1BO43795 1136 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 SERPINC1P01008 464 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 UBA7P41226 1012 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 STAT6P42226 847 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 JAG1P78504 1218 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 TRMT44Q8IYL2 757 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 VPS33BQ9H267 617 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 BLZF1Q9H2G9 400 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 RIC8AQ9NPQ8 531 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 NFE2L3Q9Y4A8 694 aa15.98■□□□□ 0.15
CDK5RAP1-202ENST00000346416 KIF13BQ9NQT8 1826 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ZBTB7AO95365 584 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 GH2P01242 217 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ERCC5P28715 1186 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 UBASH3AP57075 661 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 MED15Q96RN5 788 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CCSER1Q9C0I3 900 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 PIM2Q9P1W9 311 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 IMPACTQ9P2X3 320 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ZNRF3Q9ULT6 936 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 F5H6K3 240 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 GTPBP6O43824 516 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 KLRC3Q07444 240 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 ORC2Q13416 577 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CUL4BQ13620 913 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 RRP1BQ14684 758 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 NIM1KQ8IY84 436 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 FBXO41Q8TF61 875 aa15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 HERC5Q9UII4 1024 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CD44P16070 742 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP1-202ENST00000346416 UBE2SQ16763 222 aa15.96■□□□□ 0.15
CDK5RAP1-202ENST00000346416 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.15
CDK5RAP1-202ENST00000346416 HSP90AA4PQ58FG1 418 aa15.96■□□□□ 0.15
CDK5RAP1-202ENST00000346416 CT47A1Q5JQC4 288 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms