RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 NRBP1Q9UHY1 535 aa23.28■■□□□ 1.32
CLTA-202ENST00000345519 ICAM1P05362 532 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 NECTIN1Q15223 517 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 CCDC96Q2M329 555 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 SYDE2Q5VT97 1194 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 TTBK2Q6IQ55 1244 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 MAMDC4Q6UXC1 1216 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 ZNF467Q7Z7K2 595 aaPredicted RBP23.27■■□□□ 1.32
CLTA-202ENST00000345519 CPXCR1Q8N123 301 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 TRPV1Q8NER1 839 aa23.27■■□□□ 1.32
CLTA-202ENST00000345519 CYP2C19P33261 490 aa23.26■■□□□ 1.31
CLTA-202ENST00000345519 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
CLTA-202ENST00000345519 FGD4Q96M96 766 aa23.26■■□□□ 1.31
CLTA-202ENST00000345519 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
CLTA-202ENST00000345519 RANBP2P49792 3224 aaKnown RBP23.25■■□□□ 1.31
CLTA-202ENST00000345519 MSCO60682 206 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 FARP2O94887 1054 aaPredicted RBP23.25■■□□□ 1.31
CLTA-202ENST00000345519 PGK2P07205 417 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 TRDNQ13061 729 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 IKQ13123 557 aaPredicted RBP23.25■■□□□ 1.31
CLTA-202ENST00000345519 NCOA7Q8NI08 942 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 AGBL1Q96MI9 1066 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 UBAC1Q9BSL1 405 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 ACAD9Q9H845 621 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 KAT14Q9H8E8 782 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 FRMPD2Q68DX3 1309 aaPredicted RBP23.25■■□□□ 1.31
CLTA-202ENST00000345519 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 SYNGAP1Q96PV0 1343 aa23.25■■□□□ 1.31
CLTA-202ENST00000345519 CDC45O75419 566 aa23.24■■□□□ 1.31
CLTA-202ENST00000345519 CENPBP07199 599 aaPredicted RBP23.24■■□□□ 1.31
CLTA-202ENST00000345519 ASPRV1Q53RT3 343 aa23.24■■□□□ 1.31
CLTA-202ENST00000345519 TINF2Q9BSI4 451 aa23.24■■□□□ 1.31
CLTA-202ENST00000345519 PNMA2Q9UL42 364 aa23.24■■□□□ 1.31
CLTA-202ENST00000345519 CTDP1Q9Y5B0 961 aaPredicted RBP23.24■■□□□ 1.31
CLTA-202ENST00000345519 KIAA1217Q5T5P2 1943 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 BAZ2BQ9UIF8 2168 aaKnown RBP23.23■■□□□ 1.31
CLTA-202ENST00000345519 SLC16A2P36021 539 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 ANTXR2P58335 489 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 IFIT1BQ5T764 474 aaKnown RBP23.23■■□□□ 1.31
CLTA-202ENST00000345519 KIAA1211Q6ZU35 1233 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 FAM133AQ8N9E0 248 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 A1CFQ9NQ94 594 aaKnown RBP23.23■■□□□ 1.31
CLTA-202ENST00000345519 RNF146Q9NTX7 359 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 DDX20Q9UHI6 824 aaKnown RBP23.23■■□□□ 1.31
CLTA-202ENST00000345519 PFASO15067 1338 aa23.23■■□□□ 1.31
CLTA-202ENST00000345519 SEPT4O43236 478 aa23.22■■□□□ 1.31
CLTA-202ENST00000345519 TFRCP02786 760 aaKnown RBP23.22■■□□□ 1.31
CLTA-202ENST00000345519 PRPF38BQ5VTL8 546 aaKnown RBP23.22■■□□□ 1.31
CLTA-202ENST00000345519 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
CLTA-202ENST00000345519 MTMR7Q9Y216 660 aa23.22■■□□□ 1.31
CLTA-202ENST00000345519 SLC27A2O14975 620 aa23.21■■□□□ 1.31
CLTA-202ENST00000345519 COL6A1P12109 1028 aa23.21■■□□□ 1.31
CLTA-202ENST00000345519 RALYLQ86SE5 291 aaKnown RBP23.21■■□□□ 1.31
CLTA-202ENST00000345519 CHMP4CQ96CF2 233 aa23.21■■□□□ 1.31
CLTA-202ENST00000345519 TRERF1Q96PN7 1200 aa23.21■■□□□ 1.31
CLTA-202ENST00000345519 GPCPD1Q9NPB8 672 aa23.21■■□□□ 1.31
CLTA-202ENST00000345519 ANO2Q9NQ90 1003 aa23.21■■□□□ 1.31
CLTA-202ENST00000345519 ISY1Q9ULR0 285 aaKnown RBP23.21■■□□□ 1.31
CLTA-202ENST00000345519 MUM1L1Q5H9M0 696 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 CREB3L3Q68CJ9 461 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 CCDC174Q6PII3 467 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 ANKRD35Q8N283 1001 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 IGDCC4Q8TDY8 1250 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 MAF1Q9H063 256 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 CCPG1Q9ULG6 757 aa23.2■■□□□ 1.3
CLTA-202ENST00000345519 ASTN1O14525 1302 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 ZNF865P0CJ78 1059 aaPredicted RBP23.19■■□□□ 1.3
CLTA-202ENST00000345519 SNAP25P60880 206 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 TROAPQ12815 778 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 TSGA10IPQ3SY00 556 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 CASC1Q6TDU7 716 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
CLTA-202ENST00000345519 MTMR8Q96EF0 704 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 DDX11Q96FC9 970 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 HOMER2Q9NSB8 354 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 CYP39A1Q9NYL5 469 aa23.19■■□□□ 1.3
CLTA-202ENST00000345519 PALM3A6NDB9 673 aaPredicted RBP23.18■■□□□ 1.3
CLTA-202ENST00000345519 PARP1P09874 1014 aaKnown RBP23.18■■□□□ 1.3
CLTA-202ENST00000345519 GOLGA8HP0CJ92 632 aa23.18■■□□□ 1.3
CLTA-202ENST00000345519 ALAS1P13196 640 aa23.18■■□□□ 1.3
CLTA-202ENST00000345519 SART3Q15020 963 aaKnown RBP23.18■■□□□ 1.3
CLTA-202ENST00000345519 NECAB2Q7Z6G3 386 aa23.18■■□□□ 1.3
CLTA-202ENST00000345519 KATNBL1Q9H079 304 aa23.18■■□□□ 1.3
CLTA-202ENST00000345519 MAD2L2Q9UI95 211 aa23.18■■□□□ 1.3
CLTA-202ENST00000345519 LOC102724159A0A0B4J2E5 919 aa23.17■■□□□ 1.3
CLTA-202ENST00000345519 SNAI1O95863 264 aaPredicted RBP23.17■■□□□ 1.3
CLTA-202ENST00000345519 COL9A3Q14050 684 aaPredicted RBP23.17■■□□□ 1.3
CLTA-202ENST00000345519 PWP2Q15269 919 aaKnown RBP23.17■■□□□ 1.3
CLTA-202ENST00000345519 CLEC4DQ8WXI8 215 aa23.17■■□□□ 1.3
CLTA-202ENST00000345519 PAWRQ96IZ0 340 aaKnown RBP23.17■■□□□ 1.3
CLTA-202ENST00000345519 MAP3K14Q99558 947 aa23.17■■□□□ 1.3
CLTA-202ENST00000345519 HTATIP2Q9BUP3 242 aa23.17■■□□□ 1.3
CLTA-202ENST00000345519 SENP2Q9HC62 589 aa23.17■■□□□ 1.3
CLTA-202ENST00000345519 LTBP2Q14767 1821 aa23.17■■□□□ 1.3
CLTA-202ENST00000345519 IFIT3O14879 490 aaKnown RBP23.16■■□□□ 1.3
CLTA-202ENST00000345519 GRM4Q14833 912 aa23.16■■□□□ 1.3
CLTA-202ENST00000345519 ADGRF4Q8IZF3 695 aa23.16■■□□□ 1.3
CLTA-202ENST00000345519 MORC4Q8TE76 937 aa23.16■■□□□ 1.3
CLTA-202ENST00000345519 KCNB2Q92953 911 aa23.16■■□□□ 1.3
CLTA-202ENST00000345519 LY9Q9HBG7 655 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms