RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PPP2R5BQ15173 497 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 CMTR1Q8N1G2 835 aaKnown RBP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 GRK7Q8WTQ7 553 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 PGRMC1O00264 195 aaKnown RBP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 PRDM1O75626 825 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 PALM2Q8IXS6 379 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 NHEJ1Q9H9Q4 299 aaPredicted RBP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 TMEM51Q9NW97 253 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 A2MP01023 1474 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 MEFVO15553 781 aaPredicted RBP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 BCRP11274 1271 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 SATB1Q01826 763 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 PRR16Q569H4 304 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 GDAP1Q8TB36 358 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 FLT4P35916 1363 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 NONOQ15233 471 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL12A1-202ENST00000345356 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 ANGPTL2Q9UKU9 493 aa13.26□□□□□ -0.29
COL12A1-202ENST00000345356 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 MMEP08473 750 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 PHBP35232 272 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 MSH2P43246 934 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 BEND6Q5SZJ8 279 aaPredicted RBP13.25□□□□□ -0.29
COL12A1-202ENST00000345356 OSBPL1AQ9BXW6 950 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 PTPN22Q9Y2R2 807 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 ATF2P15336 505 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 EEF1GP26641 437 aaKnown RBP13.25□□□□□ -0.29
COL12A1-202ENST00000345356 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
COL12A1-202ENST00000345356 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 NUGGCQ68CJ6 796 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 NEK9Q8TD19 979 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 IFNB1P01574 187 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 EIF3BP55884 814 aaKnown RBP13.25□□□□□ -0.29
COL12A1-202ENST00000345356 PHEXP78562 749 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 CCDC89Q8N998 374 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 PPP4R1Q8TF05 950 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 PGBD1Q96JS3 809 aa13.25□□□□□ -0.29
COL12A1-202ENST00000345356 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
COL12A1-202ENST00000345356 RASSF10A6NK89 507 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 POC1B-GALNT4F8VUJ3 575 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 TAF5LO75529 589 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 TRPA1O75762 1119 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 HSPD1P10809 573 aaKnown RBP13.24□□□□□ -0.29
COL12A1-202ENST00000345356 CORO7P57737 925 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 VSNL1P62760 191 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 NPATQ14207 1427 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
COL12A1-202ENST00000345356 STMN1P16949 149 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 RASA3Q14644 834 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 MAGOHBQ96A72 148 aaKnown RBP13.24□□□□□ -0.29
COL12A1-202ENST00000345356 DYDC2Q96IM9 177 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 PSD3Q9NYI0 1048 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 SART1O43290 800 aaKnown RBP13.24□□□□□ -0.29
COL12A1-202ENST00000345356 GCFC2P16383 781 aaKnown RBP13.24□□□□□ -0.29
COL12A1-202ENST00000345356 BIRC3Q13489 604 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
COL12A1-202ENST00000345356 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 COG1Q8WTW3 980 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 WDR24Q96S15 920 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 RASGRF2O14827 1237 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 SPZ1Q9BXG8 430 aa13.24□□□□□ -0.29
COL12A1-202ENST00000345356 CALCRLQ16602 461 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 STRN3Q13033 797 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 PIK3R5Q8WYR1 880 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 PABPN1LA6NDY0 278 aaKnown RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 KIF23Q02241 960 aaPredicted RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 TCP11X2Q5H9J9 407 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 SLC30A9Q6PML9 568 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 PIP4K2CQ8TBX8 421 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 FGD4Q96M96 766 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 FMO2Q99518 471 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 SLC39A2Q9NP94 309 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 BATF3Q9NR55 127 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 PCDHA13Q9Y5I0 950 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 LMNAP02545 664 aaKnown RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 USP14P54578 494 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 ESRRGP62508 458 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 PSMD2Q13200 908 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms