RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PRDM5Q9NQX1 630 aaPredicted RBP14.7□□□□□ -0.06
SGCA-202ENST00000344627 STX8Q9UNK0 236 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 SUPT16HQ9Y5B9 1047 aaKnown RBP14.7□□□□□ -0.06
SGCA-202ENST00000344627 ELP1O95163 1332 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 A0A0D9SFI3 127 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 PLA2G6O60733 806 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 TLE2Q04725 743 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 NMIQ13287 307 aaPredicted RBP14.69□□□□□ -0.06
SGCA-202ENST00000344627 TKFCQ3LXA3 575 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 Q7L0L9 218 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 FAM160B2Q86V87 743 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 CHURC1Q8WUH1 139 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 PLIN4Q96Q06 1357 aa14.69□□□□□ -0.06
SGCA-202ENST00000344627 COL6A3P12111 3177 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 A0A1W2PQ45 241 aaPredicted RBP14.68□□□□□ -0.06
SGCA-202ENST00000344627 A0A1W2PQY0 241 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 TMEM232C9JQI7 657 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 ADAMTS4O75173 837 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 MCCP23508 829 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 SLC1A4P43007 532 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 NKX3-2P78367 333 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 ANKRD35Q8N283 1001 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 KLHDC9Q8NEP7 349 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 BADQ92934 168 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 GLT1D1Q96MS3 346 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 STARD7Q9NQZ5 370 aa14.68□□□□□ -0.06
SGCA-202ENST00000344627 FOXP2O15409 715 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 NMT2O60551 498 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 FGAP02671 866 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 RAG1P15918 1043 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 STAT2P52630 851 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 ACLYP53396 1101 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 HAND2P61296 217 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 NUCB1Q02818 461 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 ACVR2BQ13705 512 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 SHHQ15465 462 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 ALX1Q15699 326 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 FERMT2Q96AC1 680 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 GMCL1Q96IK5 515 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 HOMER2Q9NSB8 354 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 PNMA2Q9UL42 364 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
SGCA-202ENST00000344627 RIPK3Q9Y572 518 aa14.67□□□□□ -0.06
SGCA-202ENST00000344627 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 PGK1P00558 417 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 HSPD1P10809 573 aaKnown RBP14.66□□□□□ -0.06
SGCA-202ENST00000344627 MFAP1P55081 439 aaKnown RBP14.66□□□□□ -0.06
SGCA-202ENST00000344627 GJA9P57773 515 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 FPGSQ05932 587 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 KCTD1Q719H9 257 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 ZNF589Q86UQ0 364 aaPredicted RBP14.66□□□□□ -0.06
SGCA-202ENST00000344627 PLEKHM2Q8IWE5 1019 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
SGCA-202ENST00000344627 GUCD1Q96NT3 240 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 ANAPC4Q9UJX5 808 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 SYNRGQ9UMZ2 1314 aa14.66□□□□□ -0.06
SGCA-202ENST00000344627 LOC102724159A0A0B4J2E5 919 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 ASB14A6NK59 587 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 TLR3O15455 904 aaKnown RBP14.65□□□□□ -0.06
SGCA-202ENST00000344627 CABYRO75952 493 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 SNAI1O95863 264 aaPredicted RBP14.65□□□□□ -0.06
SGCA-202ENST00000344627 SDSP20132 328 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 NT5C2P49902 561 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 SNAP25P60880 206 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 PWP2Q15269 919 aaKnown RBP14.65□□□□□ -0.06
SGCA-202ENST00000344627 CCSAPQ6IQ19 270 aaPredicted RBP14.65□□□□□ -0.06
SGCA-202ENST00000344627 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.65□□□□□ -0.06
SGCA-202ENST00000344627 STAG1Q8WVM7 1258 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
SGCA-202ENST00000344627 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 IL17RBQ9NRM6 502 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 DIAPH3Q9NSV4 1193 aa14.65□□□□□ -0.06
SGCA-202ENST00000344627 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.65□□□□□ -0.06
SGCA-202ENST00000344627 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 ORC4O43929 436 aa14.64□□□□□ -0.07
SGCA-202ENST00000344627 TIMP1P01033 207 aa14.64□□□□□ -0.07
SGCA-202ENST00000344627 TAL1P17542 331 aaPredicted RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 IRX6P78412 446 aaPredicted RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 KCNA10Q16322 511 aa14.64□□□□□ -0.07
SGCA-202ENST00000344627 CWC27Q6UX04 472 aaKnown RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 RNPC3Q96LT9 517 aaKnown RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 ZHX1Q9UKY1 873 aaPredicted RBP14.64□□□□□ -0.07
SGCA-202ENST00000344627 Q9Y3F1 56 aa14.64□□□□□ -0.07
SGCA-202ENST00000344627 MCM3APO60318 1980 aa14.64□□□□□ -0.07
SGCA-202ENST00000344627 A0A0U1RQG5 324 aaPredicted RBP14.63□□□□□ -0.07
SGCA-202ENST00000344627 ZEB2O60315 1214 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 PQBP1O60828 265 aaKnown RBP14.63□□□□□ -0.07
SGCA-202ENST00000344627 ALAS1P13196 640 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 CDK7P50613 346 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 FAAP100Q0VG06 881 aa14.63□□□□□ -0.07
SGCA-202ENST00000344627 PPIGQ13427 754 aaKnown RBP eCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms