RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 PDHBP11177 359 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 AKR1A1P14550 325 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 CCDC96Q2M329 555 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 RANBP17Q9H2T7 1088 aaKnown RBP23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 PRO3102Q9H379 93 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 PLXNA1Q9UIW2 1896 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 FRMPD3Q5JV73 1810 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 KBTBD13C9JR72 458 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 ZNF865P0CJ78 1059 aaPredicted RBP23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 CHMLP26374 656 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 MAF1Q9H063 256 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 ABHD16BQ9H3Z7 469 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 RNF146Q9NTX7 359 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 NEDD4P46934 1319 aa23.54■■□□□ 1.36
CEACAM3-201ENST00000344550 ZNF543Q08ER8 600 aa23.53■■□□□ 1.36
CEACAM3-201ENST00000344550 PRAMEF19Q5SWL8 479 aa23.53■■□□□ 1.36
CEACAM3-201ENST00000344550 SYDE2Q5VT97 1194 aa23.53■■□□□ 1.36
CEACAM3-201ENST00000344550 FAM133AQ8N9E0 248 aa23.53■■□□□ 1.36
CEACAM3-201ENST00000344550 AGBL1Q96MI9 1066 aa23.53■■□□□ 1.36
CEACAM3-201ENST00000344550 TRERF1Q96PN7 1200 aa23.53■■□□□ 1.36
CEACAM3-201ENST00000344550 LOC102724159A0A0B4J2E5 919 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 POTEB2H3BUK9 544 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 KDM4AO75164 1064 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 SLC4A3P48751 1232 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 PWP2Q15269 919 aaKnown RBP23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 CHRDL2Q6WN34 429 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 RNF180Q86T96 592 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 ZSCAN10Q96SZ4 725 aaPredicted RBP23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 ZSWIM5Q9P217 1185 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 FAM184BQ9ULE4 1060 aa23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 U3KPZ7 1027 aaPredicted RBP23.52■■□□□ 1.36
CEACAM3-201ENST00000344550 ASB14A6NK59 587 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 SNAI1O95863 264 aaPredicted RBP23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 BMP8BP34820 402 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 C1orf53Q5VUE5 145 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 C7orf61Q8IZ16 206 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 SENP6Q9GZR1 1112 aaPredicted RBP23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 A1CFQ9NQ94 594 aaKnown RBP23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 XPNPEP3Q9NQH7 507 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 CCPG1Q9ULG6 757 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 WDR19Q8NEZ3 1342 aa23.51■■□□□ 1.35
CEACAM3-201ENST00000344550 ALAS1P13196 640 aa23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 LRRC41Q15345 812 aa23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 TSEN34Q9BSV6 310 aaKnown RBP23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 KAT14Q9H8E8 782 aa23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 HOMER2Q9NSB8 354 aa23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 ALPK3Q96L96 1907 aa23.5■■□□□ 1.35
CEACAM3-201ENST00000344550 B4E1Z4 1266 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 SGSM2O43147 1006 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 TRDNQ13061 729 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 ACVR2BQ13705 512 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 LRRC26Q2I0M4 334 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 TTBK2Q6IQ55 1244 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 CCDC174Q6PII3 467 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 PNMA1Q8ND90 353 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 FGD4Q96M96 766 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 UBAC1Q9BSL1 405 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 MTMR7Q9Y216 660 aa23.49■■□□□ 1.35
CEACAM3-201ENST00000344550 TRIOBPQ9H2D6 2365 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 DUSP11O75319 330 aaKnown RBP23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 SNX17Q15036 470 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 ASPRV1Q53RT3 343 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 GJC2Q5T442 439 aaPredicted RBP23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 ENAHQ8N8S7 591 aaPredicted RBP23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 GDF15Q99988 308 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 IL25Q9H293 177 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 GPCPD1Q9NPB8 672 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 CYP39A1Q9NYL5 469 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 RBM27Q9P2N5 1060 aaKnown RBP23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 PHF24Q9UPV7 400 aa23.48■■□□□ 1.35
CEACAM3-201ENST00000344550 TAL1P17542 331 aaPredicted RBP23.47■■□□□ 1.35
CEACAM3-201ENST00000344550 SLC16A2P36021 539 aa23.47■■□□□ 1.35
CEACAM3-201ENST00000344550 ARMCX2Q7L311 632 aa23.47■■□□□ 1.35
CEACAM3-201ENST00000344550 ADD3Q9UEY8 706 aaKnown RBP23.47■■□□□ 1.35
CEACAM3-201ENST00000344550 SMCHD1A6NHR9 2005 aa23.47■■□□□ 1.35
CEACAM3-201ENST00000344550 TNKSO95271 1327 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 FRMPD2Q68DX3 1309 aaPredicted RBP23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 SLC39A5Q6ZMH5 540 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 RASGRP2Q7LDG7 609 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 CCDC144CPQ8IYA2 1237 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 RGS22Q8NE09 1264 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 ZKSCAN3Q9BRR0 538 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 SPC25Q9HBM1 224 aa23.46■■□□□ 1.35
CEACAM3-201ENST00000344550 RANBP2P49792 3224 aaKnown RBP23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 MOXD2PA6NHM9 499 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 ADAMTS4O75173 837 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 CST5P28325 142 aaPredicted RBP23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 FXR1P51114 621 aaKnown RBP eCLIP23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 NKX3-2P78367 333 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 CNTN2Q02246 1040 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 ANO1Q5XXA6 986 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 MORC4Q8TE76 937 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 MAP4K1Q92918 833 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 CHMP4CQ96CF2 233 aa23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 ZHX1Q9UKY1 873 aaPredicted RBP23.45■■□□□ 1.34
CEACAM3-201ENST00000344550 SOWAHBA6NEL2 793 aa23.44■■□□□ 1.34
CEACAM3-201ENST00000344550 MUM1L1Q5H9M0 696 aa23.44■■□□□ 1.34
CEACAM3-201ENST00000344550 IFIT1BQ5T764 474 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms