RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 MYCNP04198 464 aaPredicted RBP21.18■□□□□ 0.98
USF2-202ENST00000343550 TOP1P11387 765 aaKnown RBP21.18■□□□□ 0.98
USF2-202ENST00000343550 MCCP23508 829 aa21.18■□□□□ 0.98
USF2-202ENST00000343550 ZNF792Q3KQV3 632 aa21.18■□□□□ 0.98
USF2-202ENST00000343550 PRPF38AQ8NAV1 312 aaKnown RBP21.18■□□□□ 0.98
USF2-202ENST00000343550 GMCL1Q96IK5 515 aa21.18■□□□□ 0.98
USF2-202ENST00000343550 ANO2Q9NQ90 1003 aa21.18■□□□□ 0.98
USF2-202ENST00000343550 NRBP1Q9UHY1 535 aa21.18■□□□□ 0.98
USF2-202ENST00000343550 E7EWF7 191 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 BMP3P12645 472 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 NECTIN1Q15223 517 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 GPR153Q6NV75 609 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 IQCA1Q86XH1 822 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 TINF2Q9BSI4 451 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 TEX13BQ9BXU2 312 aa21.17■□□□□ 0.98
USF2-202ENST00000343550 SLC1A4P43007 532 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 RTP1P59025 263 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 CCDC178Q5BJE1 867 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 SLC39A5Q6ZMH5 540 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 ANKS1AQ92625 1134 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 CHMP4CQ96CF2 233 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 ZSCAN10Q96SZ4 725 aaPredicted RBP21.16■□□□□ 0.98
USF2-202ENST00000343550 FEM1BQ9UK73 627 aa21.16■□□□□ 0.98
USF2-202ENST00000343550 COL11A1P12107 1806 aaPredicted RBP21.16■□□□□ 0.98
USF2-202ENST00000343550 TRDNQ13061 729 aa21.15■□□□□ 0.98
USF2-202ENST00000343550 LRRC41Q15345 812 aa21.15■□□□□ 0.98
USF2-202ENST00000343550 SNRNP48Q6IEG0 339 aaKnown RBP21.15■□□□□ 0.98
USF2-202ENST00000343550 STOX1Q6ZVD7 989 aa21.15■□□□□ 0.98
USF2-202ENST00000343550 LBHD1Q9BQE6 289 aaPredicted RBP21.15■□□□□ 0.98
USF2-202ENST00000343550 TMEM232C9JQI7 657 aa21.14■□□□□ 0.98
USF2-202ENST00000343550 CYB5R4Q7L1T6 521 aa21.14■□□□□ 0.98
USF2-202ENST00000343550 PRKAG2Q9UGJ0 569 aa21.14■□□□□ 0.98
USF2-202ENST00000343550 ATP11BQ9Y2G3 1177 aa21.14■□□□□ 0.98
USF2-202ENST00000343550 RIPK3Q9Y572 518 aa21.14■□□□□ 0.98
USF2-202ENST00000343550 ZNFX1Q9P2E3 1918 aaKnown RBP21.14■□□□□ 0.97
USF2-202ENST00000343550 SLC27A2O14975 620 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 ATP2A1O14983 1001 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 ZBED4O75132 1171 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 RARBP10826 455 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 TAL1P17542 331 aaPredicted RBP21.14■□□□□ 0.97
USF2-202ENST00000343550 ADCYAP1R1P41586 468 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 KCTD1Q719H9 257 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 ENAHQ8N8S7 591 aaPredicted RBP21.14■□□□□ 0.97
USF2-202ENST00000343550 NCOA7Q8NI08 942 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 KIFC2Q96AC6 838 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 XPNPEP3Q9NQH7 507 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 MTMR7Q9Y216 660 aa21.14■□□□□ 0.97
USF2-202ENST00000343550 PLA2G6O60733 806 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 CREB3L3Q68CJ9 461 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 RASGRP2Q7LDG7 609 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 CPXCR1Q8N123 301 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 CHURC1Q8WUH1 139 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 DCAF4Q8WV16 495 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 DDX11Q96FC9 970 aa21.13■□□□□ 0.97
USF2-202ENST00000343550 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
USF2-202ENST00000343550 ZNF865P0CJ78 1059 aaPredicted RBP21.12■□□□□ 0.97
USF2-202ENST00000343550 SLC4A3P48751 1232 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 STAT2P52630 851 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 SNX17Q15036 470 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 DEFB123Q8N688 67 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 FERMT2Q96AC1 680 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 UBAC1Q9BSL1 405 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 SLC38A10Q9HBR0 1119 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 CNPY2Q9Y2B0 182 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 TNKSO95271 1327 aa21.12■□□□□ 0.97
USF2-202ENST00000343550 TRIM60Q495X7 471 aa21.11■□□□□ 0.97
USF2-202ENST00000343550 RALYLQ86SE5 291 aaKnown RBP21.11■□□□□ 0.97
USF2-202ENST00000343550 FAM160B2Q86V87 743 aa21.11■□□□□ 0.97
USF2-202ENST00000343550 MSL3Q8N5Y2 521 aaKnown RBP21.11■□□□□ 0.97
USF2-202ENST00000343550 RAVER2Q9HCJ3 691 aaKnown RBP21.11■□□□□ 0.97
USF2-202ENST00000343550 ISY1Q9ULR0 285 aaKnown RBP21.11■□□□□ 0.97
USF2-202ENST00000343550 DNAJC25-GNG10A0A024R161 153 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 PGK1P00558 417 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 SNHG28P0DPA3 235 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 PDHBP11177 359 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 AKR1A1P14550 325 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 SEC23AQ15436 765 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 C1orf53Q5VUE5 145 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 RNF180Q86T96 592 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 PHF24Q9UPV7 400 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 COL6A3P12111 3177 aa21.1■□□□□ 0.97
USF2-202ENST00000343550 TTBK2Q6IQ55 1244 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 MAMDC4Q6UXC1 1216 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 Q7L0L9 218 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 PNMA1Q8ND90 353 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 KAT14Q9H8E8 782 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 SYNGAP1Q96PV0 1343 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 SNAI1O95863 264 aaPredicted RBP21.09■□□□□ 0.97
USF2-202ENST00000343550 FDX1P10109 184 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 OAZ1P54368 228 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 IKQ13123 557 aaPredicted RBP21.09■□□□□ 0.97
USF2-202ENST00000343550 CCDC96Q2M329 555 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 RNF20Q5VTR2 975 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 BTNL9Q6UXG8 535 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 CHST3Q7LGC8 479 aa21.09■□□□□ 0.97
USF2-202ENST00000343550 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
USF2-202ENST00000343550 PRDM5Q9NQX1 630 aaPredicted RBP21.09■□□□□ 0.97
USF2-202ENST00000343550 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.96
USF2-202ENST00000343550 SMCHD1A6NHR9 2005 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms