RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SMTNL1A8MU46 457 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 hCG_1984214I3L0E3 225 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 GDF11O95390 407 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 SLC16A2P36021 539 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 NONOQ15233 471 aaKnown RBP eCLIP21.12■□□□□ 0.97
HOXA9-201ENST00000343483 OGFOD1Q8N543 542 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 ZNF713Q8N859 430 aaPredicted RBP21.12■□□□□ 0.97
HOXA9-201ENST00000343483 CACTINQ8WUQ7 758 aaKnown RBP21.12■□□□□ 0.97
HOXA9-201ENST00000343483 CSRNP1Q96S65 589 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 JMJD4Q9H9V9 463 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 SIPA1L1O43166 1804 aa21.12■□□□□ 0.97
HOXA9-201ENST00000343483 COL4A5P29400 1685 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 CLRN2A0PK11 232 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 SPDYE2BA6NHP3 402 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 TCP10L2B9ZVM9 353 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 VIL1P09327 827 aaKnown RBP21.11■□□□□ 0.97
HOXA9-201ENST00000343483 SPDYE6P0CI01 402 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 AFMP43652 599 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 SEPT2Q15019 361 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 REXO1Q8N1G1 1221 aaKnown RBP21.11■□□□□ 0.97
HOXA9-201ENST00000343483 PRIMPOLQ96LW4 560 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 BIN2Q9UBW5 565 aaPredicted RBP21.11■□□□□ 0.97
HOXA9-201ENST00000343483 HDAC9Q9UKV0 1011 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 ATRNL1Q5VV63 1379 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 BMP6P22004 513 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 ICA1Q05084 483 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 NCAPHQ15003 741 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 NT5DC1Q5TFE4 455 aa21.11■□□□□ 0.97
HOXA9-201ENST00000343483 ESYT2A0FGR8 921 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 LONP1P36776 959 aaKnown RBP21.1■□□□□ 0.97
HOXA9-201ENST00000343483 DLGAP5Q15398 846 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 ABCB5Q2M3G0 1257 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 LETM2Q2VYF4 491 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 JAKMIP3Q5VZ66 844 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 TMEM179Q6ZVK1 233 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 NIM1KQ8IY84 436 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 PAGE5Q96GU1 130 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 TMEM60Q9H2L4 133 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 NYAP2Q9P242 653 aa21.1■□□□□ 0.97
HOXA9-201ENST00000343483 PNMA6FA0A0J9YX94 578 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 IKBKBO14920 756 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 SARSP49591 514 aaKnown RBP21.09■□□□□ 0.97
HOXA9-201ENST00000343483 ADCY7P51828 1080 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 DTHD1Q6ZMT9 781 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 GMLQ99445 158 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 GREB1LQ9C091 1923 aaPredicted RBP21.09■□□□□ 0.97
HOXA9-201ENST00000343483 USP17L10C9JJH3 530 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 CCNT1O60563 726 aaKnown RBP21.09■□□□□ 0.97
HOXA9-201ENST00000343483 SMC2O95347 1197 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 SLC1A4P43007 532 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 MYL5Q02045 173 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 IQUBQ8NA54 791 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 TMEM260Q9NX78 707 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 ARFGEF1Q9Y6D6 1849 aa21.09■□□□□ 0.97
HOXA9-201ENST00000343483 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 LMOD1P29536 600 aaPredicted RBP21.08■□□□□ 0.97
HOXA9-201ENST00000343483 CDC25AP30304 524 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 TXLNAP40222 546 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 ARHGAP27Q6ZUM4 889 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 NEK8Q86SG6 692 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 MYRIPQ8NFW9 859 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 MKL1Q969V6 931 aa21.08■□□□□ 0.97
HOXA9-201ENST00000343483 DYNC1I1O14576 645 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 NEMFO60524 1076 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 PPP1R11O60927 126 aaPredicted RBP21.08■□□□□ 0.96
HOXA9-201ENST00000343483 CASP1P29466 404 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 MORC3Q14149 939 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 SLFN13Q68D06 897 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 FILIP1Q7Z7B0 1213 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 TBCKQ8TEA7 893 aa21.08■□□□□ 0.96
HOXA9-201ENST00000343483 ZNF70Q9UC06 446 aaPredicted RBP21.08■□□□□ 0.96
HOXA9-201ENST00000343483 LAD1O00515 517 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 ZBTB5O15062 677 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 GH2P01242 217 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 ARID5BQ14865 1188 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 E2F4Q16254 413 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 RBM26Q5T8P6 1007 aaKnown RBP21.07■□□□□ 0.96
HOXA9-201ENST00000343483 SH3RF1Q7Z6J0 888 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 SIAH1Q8IUQ4 282 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 TRIML1Q8N9V2 468 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 SPATA20Q8TB22 786 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 PYM1Q9BRP8 204 aaKnown RBP21.07■□□□□ 0.96
HOXA9-201ENST00000343483 VPS33BQ9H267 617 aa21.07■□□□□ 0.96
HOXA9-201ENST00000343483 DCAF4Q8WV16 495 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 STAMQ92783 540 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.06■□□□□ 0.96
HOXA9-201ENST00000343483 COL2A1P02458 1487 aaPredicted RBP21.06■□□□□ 0.96
HOXA9-201ENST00000343483 MLKLQ8NB16 471 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 RASSF8Q8NHQ8 419 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 VEZTQ9HBM0 779 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 IFNKQ9P0W0 207 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 DACH1Q9UI36 760 aa21.06■□□□□ 0.96
HOXA9-201ENST00000343483 MYH4Q9Y623 1939 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 JAG1P78504 1218 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 RASSF7Q02833 373 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 PPP1R18Q6NYC8 613 aa21.05■□□□□ 0.96
HOXA9-201ENST00000343483 XPO4Q9C0E2 1151 aaKnown RBP21.05■□□□□ 0.96
HOXA9-201ENST00000343483 HSD3B7Q9H2F3 369 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms