RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 PLEKHA8P1O95397 391 aa17.32■□□□□ 0.36
CARMIL3-201ENST00000342740 CYB5R4Q7L1T6 521 aa17.32■□□□□ 0.36
CARMIL3-201ENST00000342740 MCF2L2Q86YR7 1114 aa17.32■□□□□ 0.36
CARMIL3-201ENST00000342740 MTUS1Q9ULD2 1270 aa17.32■□□□□ 0.36
CARMIL3-201ENST00000342740 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
CARMIL3-201ENST00000342740 XRCC5P13010 732 aaKnown RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 RNF187Q5TA31 235 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 TYW1BQ6NUM6 668 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 C11orf57Q6ZUT1 292 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 DDX12PQ92771 950 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 ARMCX3Q9UH62 379 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 KIAA1024Q9UPX6 916 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 NEDD4P46934 1319 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 ZC3H13Q5T200 1668 aaKnown RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 LRRC8AQ8IWT6 810 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 NUCKS1Q9H1E3 243 aaKnown RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 STX10O60499 249 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 ERCC5P28715 1186 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 OTUD6AQ7L8S5 288 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 SMCR8Q8TEV9 937 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 AK8Q96MA6 479 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 KIF2CQ99661 725 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 TRPC3Q13507 836 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 GRAMD1CQ8IYS0 662 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 TMEM87AQ8NBN3 555 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 CCDC77Q9BR77 488 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 PLA2G12BQ9BX93 195 aa17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
CARMIL3-201ENST00000342740 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 BMP3P12645 472 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 MYRIPQ8NFW9 859 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 IQCDQ96DY2 449 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 CUEDC2Q9H467 287 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 DCP1AQ9NPI6 582 aaPredicted RBP17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 NT5C2P49902 561 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 ALX1Q15699 326 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 MICALCLQ6ZW33 695 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 GLG1Q92896 1179 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 IWS1Q96ST2 819 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 DESI2Q9BSY9 194 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 MAGEF1Q9HAY2 307 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 SRPRBQ9Y5M8 271 aaKnown RBP17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 CYP2J2P51589 502 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 GSG1L2A8MUP6 293 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 BRDTQ58F21 947 aaPredicted RBP17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 CALCOCO1Q9P1Z2 691 aa17.3■□□□□ 0.36
CARMIL3-201ENST00000342740 BCRP11274 1271 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 PDIA6Q15084 440 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 TMED8Q6PL24 325 aaPredicted RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 PSMB7Q99436 277 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 ATP2A1O14983 1001 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 NFIXQ14938 502 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 TMTC3Q6ZXV5 915 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 SMYD4Q8IYR2 804 aaPredicted RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 TEKT3Q9BXF9 490 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 USP42Q9H9J4 1324 aaKnown RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 SEL1L2Q5TEA6 688 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 FOXP4Q8IVH2 680 aaPredicted RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 SULF1Q8IWU6 871 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 KCNG1Q9UIX4 513 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
CARMIL3-201ENST00000342740 IKBKBO14920 756 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 ZNF500O60304 480 aaPredicted RBP17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 XKR9Q5GH70 373 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 DPY19L2Q6NUT2 758 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 APBB1IPQ7Z5R6 666 aaPredicted RBP17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 ANKRD35Q8N283 1001 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 TTLL6Q8N841 843 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 CTTNBP2NLQ9P2B4 639 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 COBLO75128 1261 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 ELF2Q15723 593 aa17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.36
CARMIL3-201ENST00000342740 CACNB3P54284 484 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms