RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TEX2Q8IWB9 1127 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 VPS37CA5D8V6 355 aaPredicted RBP18.84■□□□□ 0.61
SNED1-202ENST00000342631 ZBED4O75132 1171 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 SLC10A3P09131 477 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 CALML3P27482 149 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 SAFBQ15424 915 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNED1-202ENST00000342631 TREML2Q5T2D2 321 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 FBXO11Q86XK2 927 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 SLC38A10Q9HBR0 1119 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
SNED1-202ENST00000342631 CCL15-CCL14A0A0B4J2E2 113 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 ESYT2A0FGR8 921 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 TESPA1A2RU30 521 aaPredicted RBP18.83■□□□□ 0.6
SNED1-202ENST00000342631 MANSC4A6NHS7 340 aaPredicted RBP18.83■□□□□ 0.6
SNED1-202ENST00000342631 STXBP3O00186 592 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 ZSCAN22P10073 491 aaPredicted RBP18.83■□□□□ 0.6
SNED1-202ENST00000342631 OSBPP22059 807 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 APLP1P51693 650 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 OAZ1P54368 228 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 INHBEP58166 350 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 CCL15Q16663 113 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 GPAT2Q6NUI2 795 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 ANKRD23Q86SG2 305 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 MB21D1Q8N884 522 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 PHF20Q9BVI0 1012 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 GLT8D2Q9H1C3 349 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 BRMS1Q9HCU9 246 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 VPS54Q9P1Q0 977 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 PNMA3Q9UL41 463 aa18.83■□□□□ 0.6
SNED1-202ENST00000342631 CTDP1Q9Y5B0 961 aaPredicted RBP18.83■□□□□ 0.6
SNED1-202ENST00000342631 VWA5AO00534 786 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 MMP1P03956 469 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 IRX3P78415 501 aaPredicted RBP18.82■□□□□ 0.6
SNED1-202ENST00000342631 ZSCAN16Q9H4T2 348 aaPredicted RBP18.82■□□□□ 0.6
SNED1-202ENST00000342631 ICAM1P05362 532 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 GNA11P29992 359 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 NAPAP54920 295 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 GTF3C2Q8WUA4 911 aaPredicted RBP18.82■□□□□ 0.6
SNED1-202ENST00000342631 GPKOWQ92917 476 aaPredicted RBP eCLIP18.82■□□□□ 0.6
SNED1-202ENST00000342631 ZMYND12Q9H0C1 365 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 ZCCHC17Q9NP64 241 aaKnown RBP18.82■□□□□ 0.6
SNED1-202ENST00000342631 PCDHA1Q9Y5I3 950 aa18.82■□□□□ 0.6
SNED1-202ENST00000342631 ATP2A1O14983 1001 aa18.81■□□□□ 0.6
SNED1-202ENST00000342631 PPP1R11O60927 126 aaPredicted RBP18.81■□□□□ 0.6
SNED1-202ENST00000342631 PKP1Q13835 747 aa18.81■□□□□ 0.6
SNED1-202ENST00000342631 ASCC2Q9H1I8 757 aaPredicted RBP18.81■□□□□ 0.6
SNED1-202ENST00000342631 ATP6V1DQ9Y5K8 247 aa18.81■□□□□ 0.6
SNED1-202ENST00000342631 SPDYE16A6NNV3 312 aaPredicted RBP18.8■□□□□ 0.6
SNED1-202ENST00000342631 NLRP5P59047 1200 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 DAGLBQ8NCG7 672 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 BICD2Q8TD16 824 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 BRI3BPQ8WY22 251 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 ATG4CQ96DT6 458 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 ZDHHC9Q9Y397 364 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 F13A1P00488 732 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 FOSBP53539 338 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 FOXP1Q9H334 677 aaPredicted RBP18.8■□□□□ 0.6
SNED1-202ENST00000342631 ABCB11O95342 1321 aa18.8■□□□□ 0.6
SNED1-202ENST00000342631 RASSF10A6NK89 507 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 FAM155AB1AL88 458 aaPredicted RBP18.79■□□□□ 0.6
SNED1-202ENST00000342631 KRT2P35908 639 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 GUCY1B3Q02153 619 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 MKRN3Q13064 507 aaKnown RBP18.79■□□□□ 0.6
SNED1-202ENST00000342631 OTUD7BQ6GQQ9 843 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
SNED1-202ENST00000342631 BRAPQ7Z569 592 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 REPS2Q8NFH8 660 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 COA7Q96BR5 231 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 PCDHA4Q9UN74 947 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 KCNJ14Q9UNX9 436 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 MRPL11Q9Y3B7 192 aaKnown RBP18.79■□□□□ 0.6
SNED1-202ENST00000342631 A0A0G2JMZ2 1700 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 ZNF536O15090 1300 aa18.79■□□□□ 0.6
SNED1-202ENST00000342631 SMCO2A6NFE2 343 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 BTBD19C9JJ37 291 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNED1-202ENST00000342631 HERVK_113P62684 666 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 SREBF2Q12772 1141 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 TYW1BQ6NUM6 668 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 CCDC174Q6PII3 467 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 SHISA4Q96DD7 197 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 P2RX7Q99572 595 aaKnown RBP18.78■□□□□ 0.6
SNED1-202ENST00000342631 MAF1Q9H063 256 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 PDHXO00330 501 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 MRPL12P52815 198 aaKnown RBP18.78■□□□□ 0.6
SNED1-202ENST00000342631 SNAP25P60880 206 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
SNED1-202ENST00000342631 GNL2Q13823 731 aaKnown RBP18.78■□□□□ 0.6
SNED1-202ENST00000342631 MCTP1Q6DN14 999 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
SNED1-202ENST00000342631 BLIDQ8IZY5 108 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 SAMD3Q8N6K7 520 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 RIC8AQ9NPQ8 531 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 CCPG1Q9ULG6 757 aa18.78■□□□□ 0.6
SNED1-202ENST00000342631 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.6
SNED1-202ENST00000342631 ADCY7P51828 1080 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms