RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ATP6V0A1Q93050 837 aa16.51■□□□□ 0.23
UBE3B-202ENST00000342494 KRT15P19012 456 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 MTX1Q13505 466 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 GBP6Q6ZN66 633 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
UBE3B-202ENST00000342494 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 AMFRQ9UKV5 643 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 ARHGAP6O43182 974 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 IFNB1P01574 187 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 SARNPP82979 210 aaKnown RBP16.5■□□□□ 0.23
UBE3B-202ENST00000342494 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-202ENST00000342494 Q3C1V9 767 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 JPH2Q9BR39 696 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-202ENST00000342494 ZNF75DP51815 510 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 PLCB4Q15147 1175 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 VPS37BQ9H9H4 285 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 TTLL1O95922 423 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 PDE6CP51160 858 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 RABGAP1Q9Y3P9 1069 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 NOC2LQ9Y3T9 749 aaKnown RBP16.5■□□□□ 0.23
UBE3B-202ENST00000342494 GDF11O95390 407 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 PPP2R5AQ15172 486 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 LRCH2Q5VUJ6 765 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 ADALQ6DHV7 355 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 POMGNT1Q8WZA1 660 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
UBE3B-202ENST00000342494 TBC1D8O95759 1140 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 PFKFB1P16118 471 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 ADORA1P30542 326 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 PTH1RQ03431 593 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 PPM1KQ8N3J5 372 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 RETREG2Q8NC44 543 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 PPFIBP2Q8ND30 876 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 PLXNC1O60486 1568 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 LONRF2Q1L5Z9 754 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 ARHGEF25Q86VW2 580 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 MICALL1Q8N3F8 863 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 SLC7A3Q8WY07 619 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 I3L4J1 428 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 UBXN2AP68543 259 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 CTAGE3PQ8IX95 158 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-202ENST00000342494 CIAO1O76071 339 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 C4orf50Q6ZRC1 276 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 KANSL2Q9H9L4 492 aa16.49■□□□□ 0.23
UBE3B-202ENST00000342494 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
UBE3B-202ENST00000342494 CLCN1P35523 988 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 AOC3Q16853 763 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 HAUS1Q96CS2 278 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 IREB2P48200 963 aaKnown RBP16.48■□□□□ 0.23
UBE3B-202ENST00000342494 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 METTL14Q9HCE5 456 aaKnown RBP16.48■□□□□ 0.23
UBE3B-202ENST00000342494 SEC31BQ9NQW1 1179 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 ABCC4O15439 1325 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
UBE3B-202ENST00000342494 PFKFB2O60825 505 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 ZNF577Q9BSK1 485 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 PARP2Q9UGN5 583 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
UBE3B-202ENST00000342494 ATP10DQ9P241 1426 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 FAM26FQ5R3K3 315 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 RUFY4Q6ZNE9 571 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 PAK2Q13177 524 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 MUM1L1Q5H9M0 696 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
UBE3B-202ENST00000342494 BTBD18B2RXH4 712 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 INO80B-WBP1J3KQ70 363 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 MORC3Q14149 939 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 RPUSD2Q8IZ73 545 aaKnown RBP16.47■□□□□ 0.23
UBE3B-202ENST00000342494 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 INO80BQ9C086 356 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-202ENST00000342494 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
UBE3B-202ENST00000342494 PIK3CAP42336 1068 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
UBE3B-202ENST00000342494 ADAM9Q13443 819 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 NEDD9Q14511 834 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 GKAP1Q5VSY0 366 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-202ENST00000342494 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 SYNJ2BP-COX16A0A087WUM0 186 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 MKRN3Q13064 507 aaKnown RBP16.47■□□□□ 0.23
UBE3B-202ENST00000342494 EXOC8Q8IYI6 725 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 COX16Q9P0S2 106 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 SEPT10Q9P0V9 454 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
UBE3B-202ENST00000342494 MYCP01106 439 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-202ENST00000342494 NME8Q8N427 588 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 GJA10Q969M2 543 aa16.46■□□□□ 0.23
UBE3B-202ENST00000342494 PLEKHG1Q9ULL1 1385 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms