RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TOB1P50616 345 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 JAG1P78504 1218 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L6PQ6QN14 398 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 FILIP1Q7Z7B0 1213 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 ANKRD7Q92527 254 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 GLIS2Q9BZE0 524 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 MYOZ2Q9NPC6 264 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 PP2D1A8MPX8 630 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 AOPEPQ8N6M6 819 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 KRI1Q8N9T8 703 aaKnown RBP14.8□□□□□ -0.04
COL18A1-201ENST00000342220 MRFAP1L1Q96HT8 127 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 CSRNP2Q9H175 543 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 ANO10Q9NW15 660 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 PKD2L1Q9P0L9 805 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 RNF181Q9P0P0 153 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 SERPINA10Q9UK55 444 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 MAPK8IP1Q9UQF2 711 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 USP27XA6NNY8 438 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 F5H6K3 240 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 DDNO94850 711 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-201ENST00000342220 KLRC3Q07444 240 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 SLC39A14Q15043 492 aa14.8□□□□□ -0.04
COL18A1-201ENST00000342220 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-201ENST00000342220 CTDP1Q9Y5B0 961 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-201ENST00000342220 HOXA13P31271 388 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 TERF2Q15554 542 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 SLC35G1Q2M3R5 365 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 RILPL1Q5EBL4 403 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 ATL3Q6DD88 541 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 ZNF592Q92610 1267 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 EEF2KMTQ96G04 330 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 KCNH3Q9ULD8 1083 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 SMTNL1A8MU46 457 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 MYCNP04198 464 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 GRM4Q14833 912 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 ADALQ6DHV7 355 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 FBXO28Q9NVF7 368 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 DOCK2Q92608 1830 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 TXKP42681 527 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 RRP1BQ14684 758 aaKnown RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 NAA30Q147X3 362 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 PFKFB3Q16875 520 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 ADGRF4Q8IZF3 695 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 FMR1NBQ8N0W7 255 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-201ENST00000342220 BLZF1Q9H2G9 400 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 SUGT1Q9Y2Z0 365 aa14.79□□□□□ -0.04
COL18A1-201ENST00000342220 H7C1D1 291 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 TGFB2P61812 414 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 NCBP1Q09161 790 aaKnown RBP14.78□□□□□ -0.04
COL18A1-201ENST00000342220 FBXL16Q8N461 479 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 DHX36Q9H2U1 1008 aaKnown RBP14.78□□□□□ -0.04
COL18A1-201ENST00000342220 CHD4Q14839 1912 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 CACNA1SQ13698 1873 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 PES1O00541 588 aaKnown RBP14.78□□□□□ -0.04
COL18A1-201ENST00000342220 LONRF3Q496Y0 759 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 FAM83BQ5T0W9 1011 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
COL18A1-201ENST00000342220 SHC4Q6S5L8 630 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 CEP57L1Q8IYX8 460 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 SERTAD1Q9UHV2 236 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 PCDHA1Q9Y5I3 950 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 MYH7P12883 1935 aa14.78□□□□□ -0.04
COL18A1-201ENST00000342220 CFBP00751 764 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 SKILP12757 684 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 EPS15P42566 896 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 FUT2Q10981 343 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 TNIP1Q15025 636 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 TMX1Q9H3N1 280 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 KANSL2Q9H9L4 492 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 C6orf50Q9HD87 102 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 POLR3EQ9NVU0 708 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 YEATS4O95619 227 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 STX17P56962 302 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 CCDC178Q5BJE1 867 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 SLC30A10Q6XR72 485 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 TANGO6Q9C0B7 1094 aa14.77□□□□□ -0.04
COL18A1-201ENST00000342220 ZKSCAN4Q969J2 545 aaPredicted RBP14.77□□□□□ -0.05
COL18A1-201ENST00000342220 ZNF341Q9BYN7 854 aa14.77□□□□□ -0.05
COL18A1-201ENST00000342220 SWAP70Q9UH65 585 aa14.77□□□□□ -0.05
COL18A1-201ENST00000342220 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.05
COL18A1-201ENST00000342220 NBPF12Q5TAG4 269 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 CEP135Q66GS9 1140 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 REXO1Q8N1G1 1221 aaKnown RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 CCDC112Q8NEF3 446 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 FOXP1Q9H334 677 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 TRMT1Q9NXH9 659 aaKnown RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 NDUFB10O96000 172 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 VIL1P09327 827 aaKnown RBP14.76□□□□□ -0.05
COL18A1-201ENST00000342220 DPCR1Q3MIW9 517 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 CCDC148Q8NFR7 591 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 TBCKQ8TEA7 893 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 PHF20Q9BVI0 1012 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 ZHX3Q9H4I2 956 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 HACL1Q9UJ83 578 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 A0A1W2PRG0 241 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 TULP2O00295 520 aa14.76□□□□□ -0.05
COL18A1-201ENST00000342220 FGRP09769 529 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms