RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PAK6Q9NQU5 681 aaPredicted RBP18■□□□□ 0.47
TNFRSF12A-202ENST00000341627 PNMA2Q9UL42 364 aa18■□□□□ 0.47
TNFRSF12A-202ENST00000341627 GTF3C3Q9Y5Q9 886 aa18■□□□□ 0.47
TNFRSF12A-202ENST00000341627 DOCK3Q8IZD9 2030 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 PDE4DIPQ5VU43 2346 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CCDC69A6NI79 296 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 FCER1AP12319 257 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 ABRAQ8N0Z2 381 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 U2AF1L4Q8WU68 220 aaKnown RBP17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 RANBP17Q9H2T7 1088 aaKnown RBP17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SENP2Q9HC62 589 aa17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 COL11A1P12107 1806 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF12A-202ENST00000341627 DDAH1O94760 285 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SGPL1O95470 568 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 MAP2K5Q13163 448 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 GRB14Q14449 540 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 KCTD2Q14681 263 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 GRM4Q14833 912 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CCL14Q16627 93 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 MAP3K21Q5TCX8 1036 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CCDC174Q6PII3 467 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 UBE2Q1Q7Z7E8 422 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 ZNF654Q8IZM8 581 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 FBXO40Q9UH90 709 aa17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 RBBP6Q7Z6E9 1792 aaKnown RBP17.98■□□□□ 0.47
TNFRSF12A-202ENST00000341627 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 FGD1P98174 961 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 TROAPQ12815 778 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 TKFCQ3LXA3 575 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 DPP9Q86TI2 863 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 TRMT44Q8IYL2 757 aaKnown RBP17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CHST13Q8NET6 341 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 NUP133Q8WUM0 1156 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 DEFB118Q96PH6 123 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 MMP19Q99542 508 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 APBA2Q99767 749 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 UBA5Q9GZZ9 404 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 GPHNQ9NQX3 736 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 RIPK3Q9Y572 518 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 ZNF536O15090 1300 aa17.97■□□□□ 0.47
TNFRSF12A-202ENST00000341627 PALM3A6NDB9 673 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 KLRF2D3W0D1 207 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 ICAM1P05362 532 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 HOXC6P09630 235 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CALM1P0DP23 149 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CALM2P0DP24 149 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CALM3P0DP25 149 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 ADORA2AP29274 412 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 KIF5BP33176 963 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SNAP25P60880 206 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 COL9A3Q14050 684 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CTCFLQ8NI51 663 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 AGBL1Q96MI9 1066 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 MAP3K14Q99558 947 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CRISPLD2Q9H0B8 497 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.96■□□□□ 0.472e-6■■■□□ 14.9
TNFRSF12A-202ENST00000341627 FLRT1Q9NZU1 646 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 MAD2L2Q9UI95 211 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 CCPG1Q9ULG6 757 aa17.96■□□□□ 0.47
TNFRSF12A-202ENST00000341627 RPTORQ8N122 1335 aa17.96■□□□□ 0.46
TNFRSF12A-202ENST00000341627 IGHA2P01877 340 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 ALAS1P13196 640 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 PRKAR2AP13861 404 aaKnown RBP17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 ADGRF4Q8IZF3 695 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 STAG2Q8N3U4 1231 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 TCEANC2Q96MN5 208 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 CPVLQ9H3G5 476 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 ACAD9Q9H845 621 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 RNF146Q9NTX7 359 aa17.95■□□□□ 0.46
TNFRSF12A-202ENST00000341627 PLXNB2O15031 1838 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 RPS6KB1P23443 525 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 CACNB2Q08289 660 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 CDC37Q16543 378 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 NPLOC4Q8TAT6 608 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 DDX11Q96FC9 970 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 TRERF1Q96PN7 1200 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 VAT1LQ9HCJ6 419 aa17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 HMX1Q9NP08 348 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF12A-202ENST00000341627 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 COBLO75128 1261 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 TFRCP02786 760 aaKnown RBP17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 CPA1P15085 419 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 GNAQP50148 359 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 ANAPC15P60006 121 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 PRPF38BQ5VTL8 546 aaKnown RBP17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 LZTS2Q9BRK4 669 aa17.93■□□□□ 0.46
TNFRSF12A-202ENST00000341627 MYL10Q9BUA6 226 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms