RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ZNF536O15090 1300 aa23.73■■□□□ 1.39
SYNE2-201ENST00000341472 KBTBD13C9JR72 458 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 SNAI1O95863 264 aaPredicted RBP23.72■■□□□ 1.39
SYNE2-201ENST00000341472 ALAS1P13196 640 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 GSPT1P15170 499 aaKnown RBP23.72■■□□□ 1.39
SYNE2-201ENST00000341472 SLC16A2P36021 539 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 CCDC178Q5BJE1 867 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 BTNL9Q6UXG8 535 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 RASGRP2Q7LDG7 609 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 TRERF1Q96PN7 1200 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 GPCPD1Q9NPB8 672 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 RNF146Q9NTX7 359 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 SYNGAP1Q96PV0 1343 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 TRIOBPQ9H2D6 2365 aa23.72■■□□□ 1.39
SYNE2-201ENST00000341472 POTEB2H3BUK9 544 aa23.71■■□□□ 1.39
SYNE2-201ENST00000341472 SYN1P17600 705 aa23.71■■□□□ 1.39
SYNE2-201ENST00000341472 FXR1P51114 621 aaKnown RBP eCLIP23.71■■□□□ 1.39
SYNE2-201ENST00000341472 ATN1P54259 1190 aaPredicted RBP23.71■■□□□ 1.39
SYNE2-201ENST00000341472 LRRC41Q15345 812 aa23.71■■□□□ 1.39
SYNE2-201ENST00000341472 DGKHQ86XP1 1220 aa23.71■■□□□ 1.39
SYNE2-201ENST00000341472 XPNPEP3Q9NQH7 507 aa23.71■■□□□ 1.39
SYNE2-201ENST00000341472 FAM184BQ9ULE4 1060 aa23.71■■□□□ 1.39
SYNE2-201ENST00000341472 NEDD4P46934 1319 aa23.7■■□□□ 1.38
SYNE2-201ENST00000341472 AKR1A1P14550 325 aa23.7■■□□□ 1.38
SYNE2-201ENST00000341472 SYDE2Q5VT97 1194 aa23.7■■□□□ 1.38
SYNE2-201ENST00000341472 IQCA1Q86XH1 822 aa23.7■■□□□ 1.38
SYNE2-201ENST00000341472 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
SYNE2-201ENST00000341472 ZKSCAN3Q9BRR0 538 aa23.7■■□□□ 1.38
SYNE2-201ENST00000341472 FRMPD2Q68DX3 1309 aaPredicted RBP23.69■■□□□ 1.38
SYNE2-201ENST00000341472 ZNF236Q9UL36 1845 aa23.69■■□□□ 1.38
SYNE2-201ENST00000341472 KDM4AO75164 1064 aa23.69■■□□□ 1.38
SYNE2-201ENST00000341472 PDHBP11177 359 aa23.69■■□□□ 1.38
SYNE2-201ENST00000341472 RNF180Q86T96 592 aa23.69■■□□□ 1.38
SYNE2-201ENST00000341472 A1CFQ9NQ94 594 aaKnown RBP23.69■■□□□ 1.38
SYNE2-201ENST00000341472 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.69■■□□□ 1.38
SYNE2-201ENST00000341472 ZHX1Q9UKY1 873 aaPredicted RBP23.69■■□□□ 1.38
SYNE2-201ENST00000341472 CCPG1Q9ULG6 757 aa23.69■■□□□ 1.38
SYNE2-201ENST00000341472 ICAM1P05362 532 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 ADCYAP1R1P41586 468 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 CNTN2Q02246 1040 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 ACVR2BQ13705 512 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 FAM133AQ8N9E0 248 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 ANKS1AQ92625 1134 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 GDF15Q99988 308 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 RANBP17Q9H2T7 1088 aaKnown RBP23.68■■□□□ 1.38
SYNE2-201ENST00000341472 ZSWIM5Q9P217 1185 aa23.68■■□□□ 1.38
SYNE2-201ENST00000341472 B4E1Z4 1266 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 PGK1P00558 417 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 CHMLP26374 656 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 BMP8BP34820 402 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 ZNF543Q08ER8 600 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 SLC39A5Q6ZMH5 540 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 FERMT2Q96AC1 680 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 FGD4Q96M96 766 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 KRT23Q9C075 422 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 IL25Q9H293 177 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 ABHD16BQ9H3Z7 469 aa23.67■■□□□ 1.38
SYNE2-201ENST00000341472 A0A1W2PPC1 479 aa23.66■■□□□ 1.38
SYNE2-201ENST00000341472 SNHG28P0DPA3 235 aa23.66■■□□□ 1.38
SYNE2-201ENST00000341472 MUM1L1Q5H9M0 696 aa23.66■■□□□ 1.38
SYNE2-201ENST00000341472 ZSCAN10Q96SZ4 725 aaPredicted RBP23.66■■□□□ 1.38
SYNE2-201ENST00000341472 CNNM2Q9H8M5 875 aa23.66■■□□□ 1.38
SYNE2-201ENST00000341472 PNMA2Q9UL42 364 aa23.66■■□□□ 1.38
SYNE2-201ENST00000341472 RAD50Q92878 1312 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 SOWAHBA6NEL2 793 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 MAGEA10P43363 369 aaPredicted RBP23.65■■□□□ 1.38
SYNE2-201ENST00000341472 RTP1P59025 263 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 ARMCX2Q7L311 632 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 CCDC144CPQ8IYA2 1237 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 KAT14Q9H8E8 782 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 PHF24Q9UPV7 400 aa23.65■■□□□ 1.38
SYNE2-201ENST00000341472 ASB14A6NK59 587 aa23.64■■□□□ 1.37
SYNE2-201ENST00000341472 DUSP11O75319 330 aaKnown RBP23.64■■□□□ 1.37
SYNE2-201ENST00000341472 GPATCH4Q5T3I0 446 aaKnown RBP23.64■■□□□ 1.37
SYNE2-201ENST00000341472 NSMFQ6X4W1 530 aa23.64■■□□□ 1.37
SYNE2-201ENST00000341472 PNMA1Q8ND90 353 aa23.64■■□□□ 1.37
SYNE2-201ENST00000341472 CYP39A1Q9NYL5 469 aa23.64■■□□□ 1.37
SYNE2-201ENST00000341472 ATP11BQ9Y2G3 1177 aa23.64■■□□□ 1.37
SYNE2-201ENST00000341472 CCDC144BQ3MJ40 725 aa23.63■■□□□ 1.37
SYNE2-201ENST00000341472 LENG1Q96BZ8 264 aaPredicted RBP23.63■■□□□ 1.37
SYNE2-201ENST00000341472 TSEN34Q9BSV6 310 aaKnown RBP23.63■■□□□ 1.37
SYNE2-201ENST00000341472 PARP14Q460N5 1801 aa23.63■■□□□ 1.37
SYNE2-201ENST00000341472 RANBP2P49792 3224 aaKnown RBP23.63■■□□□ 1.37
SYNE2-201ENST00000341472 GOLGA8HP0CJ92 632 aa23.62■■□□□ 1.37
SYNE2-201ENST00000341472 BAATQ14032 418 aaPredicted RBP23.62■■□□□ 1.37
SYNE2-201ENST00000341472 ENAHQ8N8S7 591 aaPredicted RBP23.62■■□□□ 1.37
SYNE2-201ENST00000341472 LBHD1Q9BQE6 289 aaPredicted RBP23.62■■□□□ 1.37
SYNE2-201ENST00000341472 UBAC1Q9BSL1 405 aa23.62■■□□□ 1.37
SYNE2-201ENST00000341472 UBA5Q9GZZ9 404 aa23.62■■□□□ 1.37
SYNE2-201ENST00000341472 SPC25Q9HBM1 224 aa23.62■■□□□ 1.37
SYNE2-201ENST00000341472 PRKAG2Q9UGJ0 569 aa23.62■■□□□ 1.37
SYNE2-201ENST00000341472 U3KPZ7 1027 aaPredicted RBP23.62■■□□□ 1.37
SYNE2-201ENST00000341472 MYH4Q9Y623 1939 aa23.62■■□□□ 1.37
SYNE2-201ENST00000341472 ADAMTS4O75173 837 aa23.61■■□□□ 1.37
SYNE2-201ENST00000341472 PTH1RQ03431 593 aa23.61■■□□□ 1.37
SYNE2-201ENST00000341472 TRDNQ13061 729 aa23.61■■□□□ 1.37
SYNE2-201ENST00000341472 KLHDC9Q8NEP7 349 aa23.61■■□□□ 1.37
SYNE2-201ENST00000341472 UBE2OQ9C0C9 1292 aaKnown RBP23.61■■□□□ 1.37
SYNE2-201ENST00000341472 COL11A1P12107 1806 aaPredicted RBP23.61■■□□□ 1.37
SYNE2-201ENST00000341472 MDM2Q00987 491 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms