RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 USP17L15C9J2P7 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L13C9JLJ4 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L11C9JVI0 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L18D6R9N7 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L22D6RA61 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L17D6RBQ6 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L19D6RCP7 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L20D6RJB6 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 NUCB2P80303 420 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USP17L24Q0WX57 530 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 USH1GQ495M9 461 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 POTEEQ6S8J3 1075 aa23.75■■□□□ 1.39
CLDND1-201ENST00000341181 SPDYE16A6NNV3 312 aaPredicted RBP23.74■■□□□ 1.39
CLDND1-201ENST00000341181 KIF28PB7ZC32 967 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 MMP1P03956 469 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 PHF20Q9BVI0 1012 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 ZNF536O15090 1300 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 CCL15-CCL14A0A0B4J2E2 113 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 PEX10O60683 326 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 GTF2A2P52657 109 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 TRIM29Q14134 588 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 CCL15Q16663 113 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 FOXD4L6Q3SYB3 417 aaPredicted RBP23.74■■□□□ 1.39
CLDND1-201ENST00000341181 FOXD4L3Q6VB84 417 aaPredicted RBP23.74■■□□□ 1.39
CLDND1-201ENST00000341181 OXER1Q8TDS5 423 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 SLC38A10Q9HBR0 1119 aa23.74■■□□□ 1.39
CLDND1-201ENST00000341181 COL11A1P12107 1806 aaPredicted RBP23.73■■□□□ 1.39
CLDND1-201ENST00000341181 VWA5AO00534 786 aa23.73■■□□□ 1.39
CLDND1-201ENST00000341181 NAPAP54920 295 aa23.73■■□□□ 1.39
CLDND1-201ENST00000341181 MCTP1Q6DN14 999 aa23.73■■□□□ 1.39
CLDND1-201ENST00000341181 F13A1P00488 732 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 HOXA7P31268 230 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-201ENST00000341181 DSG3P32926 999 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 COG2Q14746 738 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 FASTKD5Q7L8L6 764 aaKnown RBP23.72■■□□□ 1.39
CLDND1-201ENST00000341181 PCDHA1Q9Y5I3 950 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 FAM155AB1AL88 458 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-201ENST00000341181 SLC10A3P09131 477 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 KIF23Q02241 960 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-201ENST00000341181 NR5A1Q13285 461 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 FAM173BQ6P4H8 233 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 AGBL1Q96MI9 1066 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 PTPN18Q99952 460 aa23.72■■□□□ 1.39
CLDND1-201ENST00000341181 ASCC2Q9H1I8 757 aaPredicted RBP23.72■■□□□ 1.39
CLDND1-201ENST00000341181 BTBD19C9JJ37 291 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 CETPP11597 493 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 FBXO11Q86XK2 927 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 DIS3L2Q8IYB7 885 aaKnown RBP23.71■■□□□ 1.39
CLDND1-201ENST00000341181 BTBD18B2RXH4 712 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 XBP1P17861 261 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 RESTQ13127 1097 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 CPXCR1Q8N123 301 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 REPS2Q8NFH8 660 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 P2RX7Q99572 595 aaKnown RBP23.71■■□□□ 1.39
CLDND1-201ENST00000341181 AMNQ9BXJ7 453 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 RAVER2Q9HCJ3 691 aaKnown RBP23.71■■□□□ 1.39
CLDND1-201ENST00000341181 SH3GLB2Q9NR46 395 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 ADAMTS5Q9UNA0 930 aa23.71■■□□□ 1.39
CLDND1-201ENST00000341181 A0A0G2JMZ2 1700 aa23.7■■□□□ 1.39
CLDND1-201ENST00000341181 NLRP5P59047 1200 aa23.7■■□□□ 1.38
CLDND1-201ENST00000341181 GRM1Q13255 1194 aa23.7■■□□□ 1.38
CLDND1-201ENST00000341181 NOM1Q5C9Z4 860 aaKnown RBP23.7■■□□□ 1.38
CLDND1-201ENST00000341181 FAM43AQ8N2R8 423 aa23.7■■□□□ 1.38
CLDND1-201ENST00000341181 BAG4O95429 457 aaKnown RBP23.69■■□□□ 1.38
CLDND1-201ENST00000341181 IRX3P78415 501 aaPredicted RBP23.69■■□□□ 1.38
CLDND1-201ENST00000341181 RASGRP4Q8TDF6 673 aa23.69■■□□□ 1.38
CLDND1-201ENST00000341181 ZIC5Q96T25 663 aa23.69■■□□□ 1.38
CLDND1-201ENST00000341181 OPLAHO14841 1288 aa23.69■■□□□ 1.38
CLDND1-201ENST00000341181 CYP2C8P10632 490 aa23.69■■□□□ 1.38
CLDND1-201ENST00000341181 TMEM132BQ14DG7 1078 aa23.69■■□□□ 1.38
CLDND1-201ENST00000341181 ZMYND12Q9H0C1 365 aa23.69■■□□□ 1.38
CLDND1-201ENST00000341181 ZNF214Q9UL59 606 aaPredicted RBP23.69■■□□□ 1.38
CLDND1-201ENST00000341181 SMCO2A6NFE2 343 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 hCG_1984214I3L0E3 225 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 ICAM1P05362 532 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 CYP4F22Q6NT55 531 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 ZNF713Q8N859 430 aaPredicted RBP23.68■■□□□ 1.38
CLDND1-201ENST00000341181 CCDC148Q8NFR7 591 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 APLP1P51693 650 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 HERVK_113P62684 666 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 EARS2Q5JPH6 523 aaKnown RBP23.68■■□□□ 1.38
CLDND1-201ENST00000341181 PAXIP1Q6ZW49 1069 aaPredicted RBP23.68■■□□□ 1.38
CLDND1-201ENST00000341181 CCPG1Q9ULG6 757 aa23.68■■□□□ 1.38
CLDND1-201ENST00000341181 MYPNQ86TC9 1320 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 FAM205CA6NFA0 338 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 PDHXO00330 501 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 HOMER2Q9NSB8 354 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 HOXC10Q9NYD6 342 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 KRT2P35908 639 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 HTRA3P83110 453 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 GBP4Q96PP9 640 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 BTBD7Q9P203 1132 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 PCDHA4Q9UN74 947 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 RIPK3Q9Y572 518 aa23.67■■□□□ 1.38
CLDND1-201ENST00000341181 IGF2BP3O00425 579 aaKnown RBP eCLIP23.66■■□□□ 1.38
CLDND1-201ENST00000341181 ZBED4O75132 1171 aa23.66■■□□□ 1.38
CLDND1-201ENST00000341181 U2AF2P26368 475 aaKnown RBP eCLIP23.66■■□□□ 1.381e-8■■□□□ 13.8
CLDND1-201ENST00000341181 PPP1R18Q6NYC8 613 aa23.66■■□□□ 1.38
CLDND1-201ENST00000341181 CCDC12Q8WUD4 166 aaPredicted RBP23.66■■□□□ 1.38
CLDND1-201ENST00000341181 TNFRSF25Q93038 417 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms