RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 NT5C2P49902 561 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 DMP1Q13316 513 aaPredicted RBP14.31□□□□□ -0.12
LIN54-201ENST00000340417 PRPF38AQ8NAV1 312 aaKnown RBP14.31□□□□□ -0.12
LIN54-201ENST00000340417 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 BCL9O00512 1426 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 PNMA6FA0A0J9YX94 578 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 EXOC3O60645 756 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 STX17P56962 302 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 RCSD1Q6JBY9 416 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 C7orf31Q8N865 590 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 PARP2Q9UGN5 583 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 UBN2Q6ZU65 1347 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 TLR3O15455 904 aaKnown RBP14.31□□□□□ -0.12
LIN54-201ENST00000340417 P4HA1P13674 534 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 GPC2Q8N158 579 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 COMMD10Q9Y6G5 202 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 TFRCP02786 760 aaKnown RBP14.31□□□□□ -0.12
LIN54-201ENST00000340417 CXCL9Q07325 125 aa14.31□□□□□ -0.12
LIN54-201ENST00000340417 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 ATF7P17544 494 aaPredicted RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 ACTN2P35609 894 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 LMAN1P49257 510 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 ARID5AQ03989 594 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 SPECC1Q5M775 1068 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 ELMSAN1Q6PJG2 1045 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 ELP1O95163 1332 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 PSAPP07602 524 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 FDX1P10109 184 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 PROCA1Q8NCQ7 364 aaPredicted RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 CCDC102AQ96A19 550 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 ASB14A6NK59 587 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 JAK2O60674 1132 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 OR52Z1P0C646 297 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 TNNI1P19237 187 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 CYP4A11Q02928 519 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 TTC12Q9H892 705 aaPredicted RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 PABPN1LA6NDY0 278 aaKnown RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 AKR1B10O60218 316 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 CSF1RP07333 972 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 COG2Q14746 738 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 PGBD1Q96JS3 809 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 WDR11Q9BZH6 1224 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 FAM49AQ9H0Q0 323 aaPredicted RBP14.3□□□□□ -0.12
LIN54-201ENST00000340417 DACT1Q9NYF0 836 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 NUB1Q9Y5A7 615 aa14.3□□□□□ -0.12
LIN54-201ENST00000340417 ZNF165P49910 485 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 SNX21Q969T3 373 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 POLLQ9UGP5 575 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 SYT1P21579 422 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 MTX1Q13505 466 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 PPP2R5AQ15172 486 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 INO80BQ9C086 356 aaPredicted RBP14.29□□□□□ -0.12
LIN54-201ENST00000340417 F5H6K3 240 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 CETN3O15182 167 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 KLRC3Q07444 240 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 PRPF4BQ13523 1007 aaKnown RBP14.29□□□□□ -0.12
LIN54-201ENST00000340417 KMT5BQ4FZB7 885 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
LIN54-201ENST00000340417 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
LIN54-201ENST00000340417 CUTAO60888 179 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 SNX16P57768 344 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 NSUN6Q8TEA1 469 aaKnown RBP14.29□□□□□ -0.12
LIN54-201ENST00000340417 ZSWIM5Q9P217 1185 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 DISP2A7MBM2 1401 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 CAPN15O75808 1086 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 MMP14P50281 582 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 DGKHQ86XP1 1220 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
LIN54-201ENST00000340417 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 MED10Q9BTT4 135 aa14.29□□□□□ -0.12
LIN54-201ENST00000340417 K7ENM7 598 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 GJC1P36383 396 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 RAPGEF1Q13905 1077 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 SLC10A5Q5PT55 438 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 CEP95Q96GE4 821 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 NSUN4Q96CB9 384 aaKnown RBP14.28□□□□□ -0.12
LIN54-201ENST00000340417 PCDHA4Q9UN74 947 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIN54-201ENST00000340417 A0A1B0GVL5 298 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 ABL1P00519 1130 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 KCNH3Q9ULD8 1083 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 POLR2DO15514 142 aaKnown RBP14.28□□□□□ -0.12
LIN54-201ENST00000340417 XPOTO43592 962 aaKnown RBP14.28□□□□□ -0.12
LIN54-201ENST00000340417 TMC6Q7Z403 805 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 KIFAP3Q92845 792 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 PNPLA7Q6ZV29 1317 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 TNNC2P02585 160 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 UBE2SQ16763 222 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
LIN54-201ENST00000340417 GPRC5AQ8NFJ5 357 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms