RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 DYMQ7RTS9 669 aa13.92□□□□□ -0.18
XIRP1-201ENST00000340369 KBTBD3Q8NAB2 608 aa13.92□□□□□ -0.18
XIRP1-201ENST00000340369 RASSF4Q9H2L5 321 aa13.92□□□□□ -0.18
XIRP1-201ENST00000340369 CEP104O60308 925 aa13.92□□□□□ -0.18
XIRP1-201ENST00000340369 TAF1CQ15572 869 aaPredicted RBP13.92□□□□□ -0.18
XIRP1-201ENST00000340369 REXO1Q8N1G1 1221 aaKnown RBP13.92□□□□□ -0.18
XIRP1-201ENST00000340369 NUF2Q9BZD4 464 aa13.92□□□□□ -0.18
XIRP1-201ENST00000340369 FEZ2Q9UHY8 353 aaPredicted RBP13.92□□□□□ -0.18
XIRP1-201ENST00000340369 KDRP35968 1356 aa13.92□□□□□ -0.18
XIRP1-201ENST00000340369 TTC37Q6PGP7 1564 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 KIF3CO14782 793 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 HUNKP57058 714 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 CCDC62Q6P9F0 684 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 FAM227BQ96M60 508 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 CARD6Q9BX69 1037 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 TTLL3Q9Y4R7 772 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 PROSER3Q2NL68 480 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 DCUN1D2Q6PH85 259 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 TDRD3Q9H7E2 651 aaKnown RBP13.91□□□□□ -0.18
XIRP1-201ENST00000340369 COL15A1P39059 1388 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 TNNI1P19237 187 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 CUL4BQ13620 913 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 LMNTD2Q8IXW0 634 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 ELP3Q9H9T3 547 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.91□□□□□ -0.18
XIRP1-201ENST00000340369 GCNT3O95395 438 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 RLBP1P12271 317 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.91□□□□□ -0.18
XIRP1-201ENST00000340369 LRWD1Q9UFC0 647 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 USP6P35125 1406 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 PDE8BO95263 885 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 TAOK1Q7L7X3 1001 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 GABPB2Q8TAK5 448 aaPredicted RBP13.91□□□□□ -0.18
XIRP1-201ENST00000340369 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 TAB2Q9NYJ8 693 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
XIRP1-201ENST00000340369 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
XIRP1-201ENST00000340369 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 LRRIQ4A6NIV6 560 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 NSMCE1Q8WV22 266 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 ZNF215Q9UL58 517 aaPredicted RBP13.9□□□□□ -0.18
XIRP1-201ENST00000340369 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 PTPRTO14522 1441 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 MYO3BQ8WXR4 1341 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 PLA2G4DQ86XP0 818 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 MYO1AQ9UBC5 1043 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 PI4KBQ9UBF8 816 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 PLXNC1O60486 1568 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 NUP58Q9BVL2 599 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 SLITRK6Q9H5Y7 841 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 CCDC170Q8IYT3 715 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 MRPL44Q9H9J2 332 aaKnown RBP13.9□□□□□ -0.18
XIRP1-201ENST00000340369 MAN1A1P33908 653 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 CRKP46108 304 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 CCDC17Q96LX7 622 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
XIRP1-201ENST00000340369 I3L4J1 428 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 P4HA1P13674 534 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 DIXDC1Q155Q3 683 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 CCDC125Q86Z20 511 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 DPF3Q92784 378 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 TEKT3Q9BXF9 490 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ATF7P17544 494 aaPredicted RBP13.89□□□□□ -0.19
XIRP1-201ENST00000340369 LIG4P49917 911 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 DYNLL1P63167 89 aaKnown RBP13.89□□□□□ -0.19
XIRP1-201ENST00000340369 CMTR1Q8N1G2 835 aaKnown RBP13.89□□□□□ -0.19
XIRP1-201ENST00000340369 CFAP43Q8NDM7 1665 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ARHGEF12Q9NZN5 1544 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 PNMA6EA0A0J9YXQ4 647 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 PDE6AP16499 860 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ADORA1P30542 326 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 INPP5BP32019 993 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ECE1P42892 770 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 HERC4Q5GLZ8 1057 aaPredicted RBP13.89□□□□□ -0.19
XIRP1-201ENST00000340369 CCDC105Q8IYK2 499 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
XIRP1-201ENST00000340369 TXNDC9O14530 226 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 CUTAO60888 179 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 CCND2P30279 289 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ELF1P32519 619 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 PHKBQ93100 1093 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
XIRP1-201ENST00000340369 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
XIRP1-201ENST00000340369 OATP04181 439 aa13.88□□□□□ -0.19
XIRP1-201ENST00000340369 TUBB2AQ13885 445 aa13.88□□□□□ -0.19
XIRP1-201ENST00000340369 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
XIRP1-201ENST00000340369 IFNL3Q8IZI9 196 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms