RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DLGAP5Q15398 846 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 DRC7Q8IY82 874 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 TBCKQ8TEA7 893 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 LZTS2Q9BRK4 669 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 ZNF70Q9UC06 446 aaPredicted RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 BCS1LQ9Y276 419 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 ASTN2O75129 1339 aaPredicted RBP8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 F5H6K3 240 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 ICA1Q05084 483 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 KLRC3Q07444 240 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 ABCB5Q2M3G0 1257 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 HS1BP3Q53T59 392 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 ACER1Q8TDN7 264 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 PAGE5Q96GU1 130 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 ZNRF3Q9ULT6 936 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 PYCARDQ9ULZ3 195 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 SMCHD1A6NHR9 2005 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 CNTNAP1P78357 1384 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L15C9J2P7 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L13C9JLJ4 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L11C9JVI0 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L18D6R9N7 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L22D6RA61 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L17D6RBQ6 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L19D6RCP7 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L20D6RJB6 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 WNT10BO00744 389 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 SLC1A4P43007 532 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 SARSP49591 514 aaKnown RBP8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L24Q0WX57 530 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 ASPRV1Q53RT3 343 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 SLFN13Q68D06 897 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L6PQ6QN14 398 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 TRIM34Q9BYJ4 488 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 GLIS2Q9BZE0 524 aaPredicted RBP8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 KANSL2Q9H9L4 492 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.42□□□□□ -1.061e-7■■■■■ 44.1
SRFBP1-201ENST00000339397 MYH8P13535 1937 aa8.42□□□□□ -1.06
SRFBP1-201ENST00000339397 NT5C2P49902 561 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 RASSF7Q02833 373 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 E2F4Q16254 413 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 DALRD3Q5D0E6 543 aaKnown RBP8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 NIM1KQ8IY84 436 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 DAGLBQ8NCG7 672 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC148Q8NFR7 591 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 DPF2Q92785 391 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 FERMT2Q96AC1 680 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC17Q96LX7 622 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 P2RX7Q99572 595 aaKnown RBP8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 FANCLQ9NW38 375 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 SLC37A4O43826 429 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 TDP2O95551 362 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 NDUFB10O96000 172 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 CD44P16070 742 aaKnown RBP8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 TRAPPC10P48553 1259 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 CUL4BQ13620 913 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 SAMD1Q6SPF0 538 aaPredicted RBP8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 FILIP1Q7Z7B0 1213 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 POTEDQ86YR6 584 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 REXO1Q8N1G1 1221 aaKnown RBP8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 NLGN2Q8NFZ4 835 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 C6orf50Q9HD87 102 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 IFNKQ9P0W0 207 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 FZD1Q9UP38 647 aa8.41□□□□□ -1.06
SRFBP1-201ENST00000339397 PNMA6FA0A0J9YX94 578 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 TECP42680 631 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 DGKZQ13574 1117 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 QRICH1Q2TAL8 776 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 NAALADL2Q58DX5 795 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 SAMD7Q7Z3H4 446 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 MKL1Q969V6 931 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 XPO4Q9C0E2 1151 aaKnown RBP8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 NAT10Q9H0A0 1025 aaKnown RBP8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 MYH4Q9Y623 1939 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 TMEM232C9JQI7 657 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 ZBTB5O15062 677 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 ENTPD3O75355 529 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 CAVIN2O95810 425 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 SMARCA1P28370 1054 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 GNA11P29992 359 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 STX17P56962 302 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 NONOQ15233 471 aaKnown RBP eCLIP8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 USH1GQ495M9 461 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 NT5DC1Q5TFE4 455 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 PRAMEF18Q5VWM3 479 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 KLHL10Q6JEL2 608 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 PDXDC2PQ6P474 469 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 CACTINQ8WUQ7 758 aaKnown RBP8.4□□□□□ -1.06
SRFBP1-201ENST00000339397 SMARCE1Q969G3 411 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms