RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 MYH7P12883 1935 aa16.9■□□□□ 0.3
COMMD4-202ENST00000338995 COL11A1P12107 1806 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-202ENST00000338995 ASB14A6NK59 587 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 FOSL2P15408 326 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-202ENST00000338995 STAT2P52630 851 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 TFAP4Q01664 338 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■■□ 25.8
COMMD4-202ENST00000338995 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 CCDC144BQ3MJ40 725 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 TMEM199Q8N511 208 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 ACAD9Q9H845 621 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
COMMD4-202ENST00000338995 A0A0U1RQG5 324 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-202ENST00000338995 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 ARVCFO00192 962 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 ZEB2O60315 1214 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 ASGR1P07306 291 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 ITGB8P26012 769 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 SLC1A4P43007 532 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 GJA9P57773 515 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 CCSAPQ6IQ19 270 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-202ENST00000338995 MFSD5Q6N075 450 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 ARMCX2Q7L311 632 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 LENG1Q96BZ8 264 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-202ENST00000338995 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
COMMD4-202ENST00000338995 PARP14Q460N5 1801 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 M0R2C6 588 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 CABYRO75952 493 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 CDK7P50613 346 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 CCDC129Q6ZRS4 1044 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 LRRC47Q8N1G4 583 aaKnown RBP16.87■□□□□ 0.29
COMMD4-202ENST00000338995 SYMPKQ92797 1274 aaKnown RBP16.87■□□□□ 0.29
COMMD4-202ENST00000338995 GMCL1Q96IK5 515 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 SEZ6LQ9BYH1 1024 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
COMMD4-202ENST00000338995 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-202ENST00000338995 HOMER2Q9NSB8 354 aa16.87■□□□□ 0.29
COMMD4-202ENST00000338995 LTBP2Q14767 1821 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 PLA2G6O60733 806 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 EPHB4P54760 987 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 TNFAIP2Q03169 654 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 PPARAQ07869 468 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 TSHZ3Q63HK5 1081 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 MTIF3Q9H2K0 278 aaKnown RBP16.86■□□□□ 0.29
COMMD4-202ENST00000338995 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-202ENST00000338995 CUL9Q8IWT3 2517 aa16.86■□□□□ 0.29
COMMD4-202ENST00000338995 TSPY2A6NKD2 308 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 MCCP23508 829 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 RCSD1Q6JBY9 416 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 RNF146Q9NTX7 359 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 TBX21Q9UL17 535 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
COMMD4-202ENST00000338995 ALAS1P13196 640 aa16.84■□□□□ 0.29
COMMD4-202ENST00000338995 DNAJB2P25686 324 aa16.84■□□□□ 0.29
COMMD4-202ENST00000338995 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
COMMD4-202ENST00000338995 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
COMMD4-202ENST00000338995 TIFAQ96CG3 184 aa16.84■□□□□ 0.29
COMMD4-202ENST00000338995 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
COMMD4-202ENST00000338995 NKX3-2P78367 333 aa16.83■□□□□ 0.28
COMMD4-202ENST00000338995 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
COMMD4-202ENST00000338995 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
COMMD4-202ENST00000338995 PSRC1Q6PGN9 363 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-202ENST00000338995 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
COMMD4-202ENST00000338995 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.83■□□□□ 0.28
COMMD4-202ENST00000338995 ZNF576Q9H609 170 aa16.83■□□□□ 0.28
COMMD4-202ENST00000338995 PLIN4Q96Q06 1357 aa16.82■□□□□ 0.28
COMMD4-202ENST00000338995 DYNC1LI2O43237 492 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-202ENST00000338995 RANBP6O60518 1105 aaKnown RBP16.82■□□□□ 0.28
COMMD4-202ENST00000338995 TMEM240Q5SV17 173 aa16.82■□□□□ 0.28
COMMD4-202ENST00000338995 FGD4Q96M96 766 aa16.82■□□□□ 0.28
COMMD4-202ENST00000338995 SEC62Q99442 399 aaKnown RBP16.82■□□□□ 0.28
COMMD4-202ENST00000338995 GAS2L1Q99501 681 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-202ENST00000338995 A1CFQ9NQ94 594 aaKnown RBP16.82■□□□□ 0.28
COMMD4-202ENST00000338995 MSRAQ9UJ68 235 aa16.82■□□□□ 0.28
COMMD4-202ENST00000338995 PNMA2Q9UL42 364 aa16.82■□□□□ 0.28
COMMD4-202ENST00000338995 Q9Y3F1 56 aa16.82■□□□□ 0.28
COMMD4-202ENST00000338995 GREB1LQ9C091 1923 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-202ENST00000338995 MYH4Q9Y623 1939 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 FGBP02675 491 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 CSF2RAP15509 400 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 GRIN2CQ14957 1233 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 FSCN1Q16658 493 aaKnown RBP16.81■□□□□ 0.28
COMMD4-202ENST00000338995 KCTD1Q719H9 257 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
COMMD4-202ENST00000338995 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
COMMD4-202ENST00000338995 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
COMMD4-202ENST00000338995 SOWAHBA6NEL2 793 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 MX1P20591 662 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 BEX3Q00994 111 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 ITGA7Q13683 1181 aa16.8■□□□□ 0.28
COMMD4-202ENST00000338995 RAB30Q15771 203 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms