RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
RTN3-201ENST00000338850 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
RTN3-201ENST00000338850 ESR2Q92731 530 aa12.27□□□□□ -0.45
RTN3-201ENST00000338850 FERMT2Q96AC1 680 aa12.27□□□□□ -0.45
RTN3-201ENST00000338850 TEPSINQ96N21 525 aa12.27□□□□□ -0.45
RTN3-201ENST00000338850 R3HDMLQ9H3Y0 253 aa12.27□□□□□ -0.45
RTN3-201ENST00000338850 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.45
RTN3-201ENST00000338850 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.45
RTN3-201ENST00000338850 PRPF3O43395 683 aaKnown RBP12.26□□□□□ -0.45
RTN3-201ENST00000338850 STX10O60499 249 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 KIF20AO95235 890 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 TPM1P09493 284 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 ZSCAN20P17040 1043 aaPredicted RBP12.26□□□□□ -0.45
RTN3-201ENST00000338850 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
RTN3-201ENST00000338850 GJA5P36382 358 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 IREB2P48200 963 aaKnown RBP12.26□□□□□ -0.45
RTN3-201ENST00000338850 TRAPPC10P48553 1259 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 INHBEP58166 350 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 PPARAQ07869 468 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 SLC26A6Q9BXS9 759 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 PCDHA5Q9Y5H7 936 aa12.26□□□□□ -0.45
RTN3-201ENST00000338850 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 IGF2BP3O00425 579 aaKnown RBP eCLIP12.25□□□□□ -0.45
RTN3-201ENST00000338850 ATP8B1O43520 1251 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 ACTN4O43707 911 aaKnown RBP12.25□□□□□ -0.45
RTN3-201ENST00000338850 ORC4O43929 436 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
RTN3-201ENST00000338850 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
RTN3-201ENST00000338850 TDO2P48775 406 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 TOB1P50616 345 aaPredicted RBP12.25□□□□□ -0.45
RTN3-201ENST00000338850 SH3RF1Q7Z6J0 888 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 ANKRD13AQ8IZ07 590 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 LCORLQ8N3X6 602 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 TSC1Q92574 1164 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 PHKBQ93100 1093 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 TEKT1Q969V4 418 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 NAA15Q9BXJ9 866 aaKnown RBP12.25□□□□□ -0.45
RTN3-201ENST00000338850 TMEM39BQ9GZU3 492 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 MAN1B1Q9UKM7 699 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 ZNF215Q9UL58 517 aaPredicted RBP12.25□□□□□ -0.45
RTN3-201ENST00000338850 SLC4A4Q9Y6R1 1079 aa12.25□□□□□ -0.45
RTN3-201ENST00000338850 FKTNO75072 461 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 FECHP22830 423 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 TNNI2P48788 182 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 PLCD1P51178 756 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 CACNB3P54284 484 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 FUT2Q10981 343 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 PNOCQ13519 176 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 PKN2Q16513 984 aaKnown RBP12.24□□□□□ -0.45
RTN3-201ENST00000338850 LONRF3Q496Y0 759 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 ITIH6Q6UXX5 1313 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 TMEM139Q8IV31 216 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 SMARCE1Q969G3 411 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 ZDHHC15Q96MV8 337 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 RIOK1Q9BRS2 568 aaKnown RBP12.24□□□□□ -0.45
RTN3-201ENST00000338850 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 PHF20Q9BVI0 1012 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 TACC3Q9Y6A5 838 aa12.24□□□□□ -0.45
RTN3-201ENST00000338850 MYH1P12882 1939 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 A0A1B0GTH6 734 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 TRIM75PA6NK02 468 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 BTBD18B2RXH4 712 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 SERPINC1P01008 464 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 SOX10P56693 466 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 TUBB4BP68371 445 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 TUBB2AQ13885 445 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 SPECC1LQ69YQ0 1117 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
RTN3-201ENST00000338850 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.23□□□□□ -0.45
RTN3-201ENST00000338850 FOXP4Q8IVH2 680 aaPredicted RBP12.23□□□□□ -0.45
RTN3-201ENST00000338850 CCDC51Q96ER9 411 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 CTAGE1Q96RT6 745 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 TUBB2BQ9BVA1 445 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 BRMS1Q9HCU9 246 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 PRDM4Q9UKN5 801 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
RTN3-201ENST00000338850 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.45
RTN3-201ENST00000338850 NAV1Q8NEY1 1877 aa12.23□□□□□ -0.45
RTN3-201ENST00000338850 DDX60LQ5H9U9 1706 aaKnown RBP12.23□□□□□ -0.45
RTN3-201ENST00000338850 TNKSO95271 1327 aa12.22□□□□□ -0.45
RTN3-201ENST00000338850 OTOFQ9HC10 1997 aa12.22□□□□□ -0.45
RTN3-201ENST00000338850 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
RTN3-201ENST00000338850 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
RTN3-201ENST00000338850 BIN1O00499 593 aa12.22□□□□□ -0.45
RTN3-201ENST00000338850 SLFN14P0C7P3 912 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms