RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 CHP1Q99653 195 aa7.54□□□□□ -1.2
CAST-203ENST00000338252 SEC31BQ9NQW1 1179 aa7.54□□□□□ -1.2
CAST-203ENST00000338252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.54□□□□□ -1.28e-7■□□□□ 10
CAST-203ENST00000338252 STIM2Q9P246 746 aa7.54□□□□□ -1.2
CAST-203ENST00000338252 NRXN3Q9Y4C0 1643 aa7.54□□□□□ -1.2
CAST-203ENST00000338252 SH3TC1Q8TE82 1336 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 RNF8O76064 485 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CHGBP05060 677 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CUL4BQ13620 913 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 HIBCHQ6NVY1 386 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 B4GALNT2Q8NHY0 566 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 AGAP11Q8TF27 550 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 ZNF526Q8TF50 670 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 EDC3Q96F86 508 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 PURBQ96QR8 312 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 PPANQ9NQ55 473 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 NOP53Q9NZM5 478 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 TFR2Q9UP52 801 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 SLC12A4Q9UP95 1085 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 PCDHGA4Q9Y5G9 962 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CDC25AP30304 524 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CCNG1P51959 295 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 ZNF268Q14587 947 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 FAM196AQ6ZSG2 479 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 ARMC9Q7Z3E5 817 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 RBM12BQ8IXT5 1001 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 SPATA4Q8NEY3 305 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 NUP133Q8WUM0 1156 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CCDC43Q96MW1 224 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 MMTAG2Q9BU76 263 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 TSGA10Q9BZW7 698 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 DDX60Q8IY21 1712 aaKnown RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 LRRC10BA6NIK2 292 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 SH2B2O14492 632 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 ZSCAN9O15535 394 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 PAEPP09466 180 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 GNAT1P11488 350 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 TRIM14Q14142 442 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 CCDC122Q5T0U0 273 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CFAP58Q5T655 872 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 LMOD2Q6P5Q4 547 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CCDC170Q8IYT3 715 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 CACNA2D3Q8IZS8 1091 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 FAM81AQ8TBF8 368 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 FAM163AQ96GL9 167 aaPredicted RBP7.53□□□□□ -1.2
CAST-203ENST00000338252 TSC22D3Q99576 134 aa7.53□□□□□ -1.2
CAST-203ENST00000338252 RCCD1A6NED2 376 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 E7EWF7 191 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 DIAPH2O60879 1101 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 CDKL5O76039 1030 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 FAM153BP0C7A2 387 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 CD44P16070 742 aaKnown RBP7.52□□□□□ -1.21
CAST-203ENST00000338252 G3BP1Q13283 466 aaKnown RBP eCLIP7.52□□□□□ -1.21
CAST-203ENST00000338252 PPP1R7Q15435 360 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 FAM153CQ494X1 144 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 MCMDC2Q4G0Z9 681 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 KRT28Q7Z3Y7 464 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 FAM153AQ9UHL3 310 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 SNX12Q9UMY4 172 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 HPS5Q9UPZ3 1129 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 SYNRGQ9UMZ2 1314 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 GPR75-ASB3A0A0A6YYF3 556 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 GSTA1P08263 222 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 CTCFP49711 727 aaPredicted RBP7.52□□□□□ -1.21
CAST-203ENST00000338252 ZMYM1Q5SVZ6 1142 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 HHATQ5VTY9 493 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 ARHGAP22Q7Z5H3 698 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 PLEKHG4BQ96PX9 1271 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 NUP88Q99567 741 aaPredicted RBP7.52□□□□□ -1.21
CAST-203ENST00000338252 DNAJC7Q99615 494 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 GORASP1Q9BQQ3 440 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 TMBIM4Q9HC24 238 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 GDF3Q9NR23 364 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 PANK4Q9NVE7 773 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 ASB3Q9Y575 518 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 C4AP0C0L4 1744 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 C4BP0C0L5 1744 aa7.52□□□□□ -1.21
CAST-203ENST00000338252 A0A0G2JLW4 131 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 IFIT3O14879 490 aaKnown RBP7.51□□□□□ -1.21
CAST-203ENST00000338252 LUC7L3O95232 432 aaKnown RBP7.51□□□□□ -1.21
CAST-203ENST00000338252 IDEP14735 1019 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 PRLRP16471 622 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 KRT9P35527 623 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 MRPS25P82663 173 aaKnown RBP7.51□□□□□ -1.21
CAST-203ENST00000338252 PPARAQ07869 468 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 CDC37Q16543 378 aaPredicted RBP7.51□□□□□ -1.21
CAST-203ENST00000338252 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 WDR59Q6PJI9 974 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 CHST3Q7LGC8 479 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 VPS37DQ86XT2 251 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 GRAMD1CQ8IYS0 662 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 RBM41Q96IZ5 413 aaKnown RBP7.51□□□□□ -1.21
CAST-203ENST00000338252 LACRTQ9GZZ8 138 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 JADE2Q9NQC1 790 aa7.51□□□□□ -1.21
CAST-203ENST00000338252 BTG4Q9NY30 223 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms