RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 LMNB2Q03252 620 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 GRAMD1BQ3KR37 738 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 CHAMP1Q96JM3 812 aa10.71□□□□□ -0.69
COL4A6-201ENST00000334504 RBL2Q08999 1139 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 BFSP1Q12934 665 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 HP1BP3Q5SSJ5 553 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-201ENST00000334504 MYSM1Q5VVJ2 828 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 USP28Q96RU2 1077 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 MAD1L1Q9Y6D9 718 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 STK24Q9Y6E0 443 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 hCG_1642624A0A1W2PR95 340 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 EFHD1Q9BUP0 239 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 NBPF3Q9H094 633 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 ZNF711Q9Y462 761 aa10.71□□□□□ -0.7
COL4A6-201ENST00000334504 COBLO75128 1261 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 STAM2O75886 525 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 XRCC5P13010 732 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 GNPTABQ3T906 1256 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 TDRD7Q8NHU6 1098 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 CACTINQ8WUQ7 758 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 SMYD2Q9NRG4 433 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 PHF8Q9UPP1 1060 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ZNF148Q9UQR1 794 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 SYNJ1O43426 1573 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 PARD3Q8TEW0 1356 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 GOLGA8QA0A0J9YX86 632 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 GOLGA8OA6NCC3 632 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 GOLGA8NF8WBI6 632 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 LONP1P36776 959 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 NDUFA8P51970 172 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 SCYL2Q6P3W7 929 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 TRMT10CQ7L0Y3 403 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ANKRD35Q8N283 1001 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 VPS54Q9P1Q0 977 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 PLCG2P16885 1265 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ECE1P42892 770 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 CYP2J2P51589 502 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ADCY7P51828 1080 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 COPB1P53618 953 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 PLTPP55058 493 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ALS2CLQ60I27 953 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 CCDC151A5D8V7 595 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 H0Y3Z8 333 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 LMNAP02545 664 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ESRRAP11474 423 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 SUFUQ9UMX1 484 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 PDE6BP35913 854 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 DHX9Q08211 1270 aaKnown RBP10.7□□□□□ -0.7
COL4A6-201ENST00000334504 TRIM42Q8IWZ5 723 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 TBK1Q9UHD2 729 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 PARP3Q9Y6F1 533 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
COL4A6-201ENST00000334504 B4DLN1 442 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 MAP3K7CLP57077 242 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 STX1BP61266 288 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 ARMC2Q8NEN0 867 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 MAGOHBQ96A72 148 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 MTMR6Q9Y217 621 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 RPRD2Q5VT52 1461 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 H7C1D1 291 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 SPAG7O75391 227 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 LDHBP07195 334 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 H2AFZP0C0S5 128 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 CDR2Q01850 454 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 HADHQ16836 314 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 H2AFVQ71UI9 128 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 MYOCDQ8IZQ8 938 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 SPC25Q9HBM1 224 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 DAAM1Q9Y4D1 1078 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 KIF14Q15058 1648 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 HMGB1P1B2RPK0 211 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 GSTA4O15217 222 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 CXCR5P32302 372 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 OCA2Q04671 838 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 WDR91A4D1P6 747 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 CFLARO15519 480 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 GPAA1O43292 621 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 MCF2P10911 925 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 SLC7A5Q01650 507 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 TMEM259Q4ZIN3 620 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 PSPC1Q8WXF1 523 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 ELAC2Q9BQ52 826 aaKnown RBP10.69□□□□□ -0.7
COL4A6-201ENST00000334504 CAPN11Q9UMQ6 739 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 PCDHA7Q9UN72 937 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 DNAJC6O75061 913 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 MOCS3O95396 460 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms