RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 PHACTR2O75167 634 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 LMAN1P49257 510 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 TFAP4Q01664 338 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 SLC44A5Q8NCS7 719 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 CCDC51Q96ER9 411 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-201ENST00000333371 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 VPS18Q9P253 973 aa13.86□□□□□ -0.19
VPS33B-201ENST00000333371 EPN1Q9Y6I3 576 aaPredicted RBP13.86□□□□□ -0.19
VPS33B-201ENST00000333371 GOLGB1Q14789 3259 aaKnown RBP13.85□□□□□ -0.19
VPS33B-201ENST00000333371 ORC4O43929 436 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 NDUFA10O95299 355 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 GOLGA8HP0CJ92 632 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 MSANTD4Q8NCY6 345 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 CRNKL1Q9BZJ0 848 aaKnown RBP13.85□□□□□ -0.19
VPS33B-201ENST00000333371 CALCOCO1Q9P1Z2 691 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 SBF2Q86WG5 1849 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 LY75O60449 1722 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 CTAGE15A4D2H0 777 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 CTAGE8P0CG41 777 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 FAM196AQ6ZSG2 479 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 FBXO33Q7Z6M2 555 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 CTAGE6Q86UF2 777 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 CTAGE4Q8IX94 777 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 AGPAT5Q9NUQ2 364 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
VPS33B-201ENST00000333371 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-201ENST00000333371 HIBADHP31937 336 aaKnown RBP13.84□□□□□ -0.19
VPS33B-201ENST00000333371 HERVK_113P62684 666 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-201ENST00000333371 AMPD2Q01433 879 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 HPS3Q969F9 1004 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 CAPZA3Q96KX2 299 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 KAT14Q9H8E8 782 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 RAB21Q9UL25 225 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 MYO6Q9UM54 1294 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 L1RE1Q9UN81 338 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 B4DLN1 442 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 CYTH3O43739 400 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 KLRC4O43908 158 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 ATP1A1P05023 1023 aaKnown RBP13.84□□□□□ -0.19
VPS33B-201ENST00000333371 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 GDAP1L1Q96MZ0 367 aa13.84□□□□□ -0.19
VPS33B-201ENST00000333371 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 RCCD1A6NED2 376 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 ZMYND10O75800 440 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 LONP1P36776 959 aaKnown RBP13.83□□□□□ -0.19
VPS33B-201ENST00000333371 TRAPPC10P48553 1259 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 FAM193AP78312 1265 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 SPAG1Q07617 926 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 PCDHA4Q9UN74 947 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 DUSP10Q9Y6W6 482 aa13.83□□□□□ -0.19
VPS33B-201ENST00000333371 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 CAPN2P17655 700 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 GRIK5Q16478 980 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 TRPC5Q9UL62 973 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-201ENST00000333371 PCDHA6Q9UN73 950 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 FAN1Q9Y2M0 1017 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 PCDHA8Q9Y5H6 950 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-201ENST00000333371 USP5P45974 858 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 HDXQ7Z353 690 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 CNBD1Q8NA66 436 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 ZNF507Q8TCN5 953 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
VPS33B-201ENST00000333371 LUC7L2Q9Y383 392 aaKnown RBP13.83□□□□□ -0.2
VPS33B-201ENST00000333371 LGALS16A8MUM7 142 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 H7C1D1 291 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 ERCC3P19447 782 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 UBA7P41226 1012 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 CYP27A1Q02318 531 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 CASP8Q14790 479 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 HNRNPLLQ8WVV9 542 aaKnown RBP13.82□□□□□ -0.2
VPS33B-201ENST00000333371 LACRTQ9GZZ8 138 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 RASSF10A6NK89 507 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 FCER1AP12319 257 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 RAD51AP2Q09MP3 1159 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 NFIXQ14938 502 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 CCDC122Q5T0U0 273 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 ARL6IP4Q66PJ3 421 aaKnown RBP13.82□□□□□ -0.2
VPS33B-201ENST00000333371 GSPT2Q8IYD1 628 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms