RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 LRRC10BA6NIK2 292 aa20.31■□□□□ 0.84
SOCS3-201ENST00000330871 NFRKBQ6P4R8 1299 aa20.31■□□□□ 0.84
SOCS3-201ENST00000330871 IFT81Q8WYA0 676 aa20.31■□□□□ 0.84
SOCS3-201ENST00000330871 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.31■□□□□ 0.84
SOCS3-201ENST00000330871 ATP6V0A4Q9HBG4 840 aa20.31■□□□□ 0.84
SOCS3-201ENST00000330871 NFU1Q9UMS0 254 aa20.31■□□□□ 0.84
SOCS3-201ENST00000330871 ABCC12Q96J65 1359 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 SAFBQ15424 915 aaKnown RBP eCLIP20.3■□□□□ 0.84
SOCS3-201ENST00000330871 CMTR1Q8N1G2 835 aaKnown RBP20.3■□□□□ 0.84
SOCS3-201ENST00000330871 OXER1Q8TDS5 423 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 INCENPQ9NQS7 918 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 KIF1AQ12756 1690 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 B4E1Z4 1266 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 MMP1P03956 469 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 CARSP49589 748 aaKnown RBP20.3■□□□□ 0.84
SOCS3-201ENST00000330871 SSRP1Q08945 709 aaKnown RBP20.3■□□□□ 0.84
SOCS3-201ENST00000330871 GRIK3Q13003 919 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 QPCTQ16769 361 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 CABP5Q9NP86 173 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 STRN4Q9NRL3 753 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 AGPAT5Q9NUQ2 364 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 CAPN6Q9Y6Q1 641 aa20.3■□□□□ 0.84
SOCS3-201ENST00000330871 ANO9A1A5B4 782 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 TBC1D10CQ8IV04 446 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 ZNF579Q8NAF0 562 aaKnown RBP20.29■□□□□ 0.84
SOCS3-201ENST00000330871 CAVIN3Q969G5 261 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 FAM205CA6NFA0 338 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 ANKRD20A8PQ5CZ79 823 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 RILPL1Q5EBL4 403 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 KRT26Q7Z3Y9 468 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 IQCKQ8N0W5 287 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 SYMPKQ92797 1274 aaKnown RBP20.29■□□□□ 0.84
SOCS3-201ENST00000330871 SPDL1Q96EA4 605 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 TMEM87BQ96K49 555 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 DNAJC7Q99615 494 aa20.29■□□□□ 0.84
SOCS3-201ENST00000330871 ACTR5Q9H9F9 607 aaPredicted RBP20.29■□□□□ 0.84
SOCS3-201ENST00000330871 DDX60Q8IY21 1712 aaKnown RBP20.29■□□□□ 0.84
SOCS3-201ENST00000330871 CDC25CP30307 473 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 ZKSCAN8Q15776 578 aaPredicted RBP20.28■□□□□ 0.84
SOCS3-201ENST00000330871 GPIHBP1Q8IV16 184 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 RASSF8Q8NHQ8 419 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 NELFBQ8WX92 580 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 THOC1Q96FV9 657 aaKnown RBP20.28■□□□□ 0.84
SOCS3-201ENST00000330871 GSDMAQ96QA5 445 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 MLXIPQ9HAP2 919 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 LRWD1Q9UFC0 647 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 TRPM3Q9HCF6 1732 aaPredicted RBP20.28■□□□□ 0.84
SOCS3-201ENST00000330871 IPO7O95373 1038 aaKnown RBP20.28■□□□□ 0.84
SOCS3-201ENST00000330871 CCDC181Q5TID7 509 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 C8orf74Q6P047 294 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
SOCS3-201ENST00000330871 NHEJ1Q9H9Q4 299 aaPredicted RBP20.28■□□□□ 0.84
SOCS3-201ENST00000330871 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 DRP2Q13474 957 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 SH3RF1Q7Z6J0 888 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 CCDC50Q8IVM0 306 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 ARMC2Q8NEN0 867 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 PIK3R5Q8WYR1 880 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 CALR3Q96L12 384 aaKnown RBP20.27■□□□□ 0.84
SOCS3-201ENST00000330871 RBM12Q9NTZ6 932 aaKnown RBP20.27■□□□□ 0.84
SOCS3-201ENST00000330871 RBM28Q9NW13 759 aaKnown RBP20.27■□□□□ 0.84
SOCS3-201ENST00000330871 BAIAP2L1Q9UHR4 511 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 TRIM49BA6NDI0 452 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 NCK2O43639 380 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 GLI1P08151 1106 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 SCTRP47872 440 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 VAV2P52735 878 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 PAK1Q13153 545 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 MB21D1Q8N884 522 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 ATP6V1G3Q96LB4 118 aa20.27■□□□□ 0.84
SOCS3-201ENST00000330871 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.83
SOCS3-201ENST00000330871 MOCS3O95396 460 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 ADD2P35612 726 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 CYLC1P35663 651 aaPredicted RBP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 KLK7P49862 253 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 KIF5AQ12840 1032 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 ITGB3BPQ13352 177 aaPredicted RBP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 CCDC96Q2M329 555 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 TMED8Q6PL24 325 aaPredicted RBP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 MAATS1Q7Z4T9 603 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 EEF2KMTQ96G04 330 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 OSBPL9Q96SU4 736 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 MYO5AQ9Y4I1 1855 aaKnown RBP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 SLC8A1P32418 973 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 SPAG1Q07617 926 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 STAMBPL1Q96FJ0 436 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 RSRC1Q96IZ7 334 aaKnown RBP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 TJP1Q07157 1748 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 TMOD1P28289 359 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 SF3A3Q12874 501 aaKnown RBP eCLIP20.26■□□□□ 0.83
SOCS3-201ENST00000330871 NBPF20Q3BBV1 942 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 SGMS1Q86VZ5 419 aa20.26■□□□□ 0.83
SOCS3-201ENST00000330871 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 ENO4A6NNW6 628 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 MYO1EQ12965 1108 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms