RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 GLIS2Q9BZE0 524 aaPredicted RBP16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 MFSD14CQ5VZR4 134 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 NELFCDQ8IXH7 590 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 ABI1Q8IZP0 508 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 SLC7A3Q8WY07 619 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 SEPT9Q9UHD8 586 aaPredicted RBP16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 RFX1P22670 979 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 TBCKQ8TEA7 893 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 PARK7Q99497 189 aaKnown RBP16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 ERLIN2O94905 339 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 KRT19P08727 400 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 RFX5P48382 616 aaPredicted RBP16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 ZKSCAN4Q969J2 545 aaPredicted RBP16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 KCNG1Q9UIX4 513 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 EXOC3O60645 756 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 HDLBPQ00341 1268 aaKnown RBP16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 FBXO18Q8NFZ0 1043 aa16.1■□□□□ 0.17
SYNGR1-203ENST00000328933 ERCC3P19447 782 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 CYP2B6P20813 491 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 TMC6Q7Z403 805 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 GTPBP4Q9BZE4 634 aaKnown RBP16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 LARSQ9P2J5 1176 aaKnown RBP16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 PLEKHA8P1O95397 391 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 CETPP11597 493 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 FAM193BQ96PV7 902 aaPredicted RBP16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 DNAJC25Q9H1X3 360 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 SIGLEC1Q9BZZ2 1709 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 IFNAR1P17181 557 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 CTNNA2P26232 953 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 NT5C2P49902 561 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 SREBF2Q12772 1141 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 NFIAQ12857 509 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 CNNM4Q6P4Q7 775 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 GPBP1Q86WP2 473 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 ZNF354CQ86Y25 554 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 RDH13Q8NBN7 331 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 RUFY1Q96T51 708 aa16.09■□□□□ 0.17
SYNGR1-203ENST00000328933 CETN3O15182 167 aa16.08■□□□□ 0.17
SYNGR1-203ENST00000328933 PTGDRQ13258 359 aa16.08■□□□□ 0.17
SYNGR1-203ENST00000328933 PDXDC2PQ6P474 469 aa16.08■□□□□ 0.17
SYNGR1-203ENST00000328933 GPC2Q8N158 579 aa16.08■□□□□ 0.17
SYNGR1-203ENST00000328933 MMP19Q99542 508 aa16.08■□□□□ 0.17
SYNGR1-203ENST00000328933 ZNF215Q9UL58 517 aaPredicted RBP16.08■□□□□ 0.17
SYNGR1-203ENST00000328933 C19orf81C9J6K1 198 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 STXBP2Q15833 593 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 INO80BQ9C086 356 aaPredicted RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 EPB41P11171 864 aaKnown RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 MARK3P27448 753 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 UBASH3AP57075 661 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 WDR44Q5JSH3 913 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 FAM49AQ9H0Q0 323 aaPredicted RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 ZBTB5O15062 677 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 HOXA10P31260 410 aaPredicted RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 ANO6Q4KMQ2 910 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 NBPF12Q5TAG4 269 aaPredicted RBP16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 PCDHA4Q9UN74 947 aa16.08■□□□□ 0.16
SYNGR1-203ENST00000328933 NEDD4P46934 1319 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 CAVIN2O95810 425 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 MYL3P08590 195 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 NFX1Q12986 1120 aaKnown RBP16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 NSUN6Q8TEA1 469 aaKnown RBP16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 MKRN1Q9UHC7 482 aaKnown RBP16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 KDM3AQ9Y4C1 1321 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 CHGBP05060 677 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 WDR11Q9BZH6 1224 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 USP17L6PQ6QN14 398 aa16.07■□□□□ 0.16
SYNGR1-203ENST00000328933 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 NR1I2O75469 434 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 NR5A1Q13285 461 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 CEP170P1Q96L14 293 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 TEX13BQ9BXU2 312 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 ANO3Q9BYT9 981 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 KCNH4Q9UQ05 1017 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 ADAMTSL3P82987 1691 aa16.06■□□□□ 0.16
SYNGR1-203ENST00000328933 SKIDA1Q1XH10 827 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms