RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 LTBP2Q14767 1821 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 RANBP6O60518 1105 aaKnown RBP20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 FGAP02671 866 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 TLE2Q04725 743 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 IKQ13123 557 aaPredicted RBP20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 FAM109BQ6ICB4 259 aaPredicted RBP20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 FAM133AQ8N9E0 248 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 TOX2Q96NM4 488 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 SPC25Q9HBM1 224 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 PDLIM7Q9NR12 457 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 TCP11L1Q9NUJ3 509 aa20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 ZHX1Q9UKY1 873 aaPredicted RBP20.93■□□□□ 0.94
PTPMT1-201ENST00000326656 A0A1W2PQ45 241 aaPredicted RBP20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 A0A1W2PQY0 241 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 POTEB2H3BUK9 544 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 CST5P28325 142 aaPredicted RBP20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 NT5C2P49902 561 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 ACLYP53396 1101 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 PCSK9Q8NBP7 692 aaKnown RBP20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 DCAF4Q8WV16 495 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 FGD4Q96M96 766 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 INCENPQ9NQS7 918 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 PRDM5Q9NQX1 630 aaPredicted RBP20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 ISY1Q9ULR0 285 aaKnown RBP20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 ZNF536O15090 1300 aa20.92■□□□□ 0.94
PTPMT1-201ENST00000326656 ELP1O95163 1332 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 HSPD1P10809 573 aaKnown RBP20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 NKX3-2P78367 333 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 CCSAPQ6IQ19 270 aaPredicted RBP20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 ARMCX2Q7L311 632 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 ANKRD33Q7Z3H0 272 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 FAM227BQ96M60 508 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 AGBL1Q96MI9 1066 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 OSBPL3Q9H4L5 887 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 RNF146Q9NTX7 359 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 PRR12Q9ULL5 1215 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 SYNRGQ9UMZ2 1314 aa20.91■□□□□ 0.94
PTPMT1-201ENST00000326656 A0A0D9SFI3 127 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 ASB14A6NK59 587 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 KIAA0355O15063 1070 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 NMT2O60551 498 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 CLTBP09497 229 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 TOP1P11387 765 aaKnown RBP20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 CCDC144BQ3MJ40 725 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 BTNL9Q6UXG8 535 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 KCTD1Q719H9 257 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 TTC14Q96N46 770 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 TRERF1Q96PN7 1200 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 UPF3AQ9H1J1 476 aaKnown RBP20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 A1CFQ9NQ94 594 aaKnown RBP20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 HOMER2Q9NSB8 354 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 MTMR10Q9NXD2 777 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 PNMA2Q9UL42 364 aa20.9■□□□□ 0.94
PTPMT1-201ENST00000326656 MCM3APO60318 1980 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 TRIM43BA6NCK2 446 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 DCDC2CA8MYV0 355 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 TRIM6-TRIM34B2RNG4 842 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 GJA9P57773 515 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 CNTN2Q02246 1040 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 KCNA10Q16322 511 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 BADQ92934 168 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 TRIM43Q96BQ3 446 aaPredicted RBP20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 GLT1D1Q96MS3 346 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 STARD7Q9NQZ5 370 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 STXBP5LQ9Y2K9 1186 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 COL6A3P12111 3177 aa20.89■□□□□ 0.93
PTPMT1-201ENST00000326656 MROH7Q68CQ1 1323 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 CCDC171Q6TFL3 1326 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 ICAM1P05362 532 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 ALAS1P13196 640 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 NMIQ13287 307 aaPredicted RBP20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 SH3RF1Q7Z6J0 888 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 KATNBL1Q9H079 304 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 TOMM22Q9NS69 142 aa20.88■□□□□ 0.93
PTPMT1-201ENST00000326656 LOC102724159A0A0B4J2E5 919 aa20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 C6orf222P0C671 652 aaPredicted RBP20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 PWP2Q15269 919 aaKnown RBP20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 SHHQ15465 462 aa20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 GNASQ5JWF2 1037 aa20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 MFSD6Q6ZSS7 791 aa20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 RILPL2Q969X0 211 aa20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 LENG1Q96BZ8 264 aaPredicted RBP20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 TMEM47Q9BQJ4 181 aa20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 RNF41Q9H4P4 317 aaPredicted RBP20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 LAMA2P24043 3122 aaKnown RBP20.87■□□□□ 0.93
PTPMT1-201ENST00000326656 SOWAHBA6NEL2 793 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 PQBP1O60828 265 aaKnown RBP20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 SDSP20132 328 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 NUCB1Q02818 461 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 CCDC96Q2M329 555 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 AKNAD1Q5T1N1 836 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 Q7L0L9 218 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 PLEKHM2Q8IWE5 1019 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 RANBP17Q9H2T7 1088 aaKnown RBP20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
PTPMT1-201ENST00000326656 CYP39A1Q9NYL5 469 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms