RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MYH15Q9Y2K3 1946 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 KLRF2D3W0D1 207 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 H7C1D1 291 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 PLCG1P19174 1290 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 LONP1P36776 959 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 RCAN1P53805 252 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 PPARDQ03181 441 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 ARID5AQ03989 594 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 CCDC181Q5TID7 509 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 SLC51AQ86UW1 340 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 AGPAT5Q9NUQ2 364 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 CWC15Q9P013 229 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 COL18A1P39060 1754 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 FAM170AA1A519 330 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 VGLL3A8MV65 326 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ANKRD65E5RJM6 399 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 APTXQ7Z2E3 356 aaKnown RBP14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 SPATA20Q8TB22 786 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 SH3RF3Q8TEJ3 882 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 SAR1BQ9Y6B6 198 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ZNF804BA4D1E1 1349 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 KIF5AQ12840 1032 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 TRIM14Q14142 442 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 DNAJC21Q5F1R6 531 aaKnown RBP14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 PDXDC2PQ6P474 469 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 CACNA2D4Q7Z3S7 1137 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 SH3RF1Q7Z6J0 888 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ELOA2Q8IYF1 753 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 MB21D1Q8N884 522 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ZNF384Q8TF68 577 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 CALML4Q96GE6 196 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 MTA3Q9BTC8 594 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ANKZF1Q9H8Y5 726 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ATP8A2Q9NTI2 1148 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 ANAPC4Q9UJX5 808 aa14.43□□□□□ -0.1
HMGCS1-201ENST00000325110 LAMB4A4D0S4 1761 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 BAG3O95817 575 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 FCER1AP12319 257 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 CASP8Q14790 479 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 KRT26Q7Z3Y9 468 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 RSPH14Q9UHP6 348 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 SMCO2A6NFE2 343 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 ATP1A1P05023 1023 aaKnown RBP14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 TNNI2P48788 182 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 FRMPD2Q68DX3 1309 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 CXCR5P32302 372 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 TRAPPC10P48553 1259 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 GNAQP50148 359 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 KRT83P78385 493 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 WHAMMP3Q1A5X7 153 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 C2CD5Q86YS7 1000 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 SMCR8Q8TEV9 937 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 TBC1D7Q9P0N9 293 aa14.42□□□□□ -0.1
HMGCS1-201ENST00000325110 AKAP11Q9UKA4 1901 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 NPY5RQ15761 445 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 TXNRD1Q16881 649 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 TPTE2Q6XPS3 522 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 DUSP10Q9Y6W6 482 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 SEMA3EO15041 775 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 ZNF185O15231 689 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 E2F4Q16254 413 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 SPTY2D1Q68D10 685 aaPredicted RBP14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 ATP8B1O43520 1251 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 RNASE9P60153 205 aaKnown RBP14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 LRRC41Q15345 812 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 GPCPD1Q9NPB8 672 aa14.41□□□□□ -0.1
HMGCS1-201ENST00000325110 LGALS16A8MUM7 142 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 TEX11Q8IYF3 940 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 HAUS4Q9H6D7 363 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 NLRC4Q9NPP4 1024 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 PKD1L3Q7Z443 1732 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 DNM2P50570 870 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 MMS19Q96T76 1030 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 C6orf50Q9HD87 102 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 MYH2Q9UKX2 1941 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 OR52Z1P0C646 297 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 C2orf54Q08AI8 447 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 STK4Q13043 487 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 BEND6Q5SZJ8 279 aaPredicted RBP14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 RUFY1Q96T51 708 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 EYA3Q99504 573 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 TMEM47Q9BQJ4 181 aa14.4□□□□□ -0.1
HMGCS1-201ENST00000325110 USO1O60763 962 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-201ENST00000325110 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-201ENST00000325110 EPS15P42566 896 aa14.39□□□□□ -0.11
HMGCS1-201ENST00000325110 RRP36Q96EU6 259 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-201ENST00000325110 ANKRD2Q9GZV1 360 aa14.39□□□□□ -0.11
HMGCS1-201ENST00000325110 NHEJ1Q9H9Q4 299 aaPredicted RBP14.39□□□□□ -0.11
HMGCS1-201ENST00000325110 LRWD1Q9UFC0 647 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms