RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 SLC26A6Q9BXS9 759 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 FAM153AQ9UHL3 310 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 CAPN6Q9Y6Q1 641 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 ALS2Q96Q42 1657 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 MYH2Q9UKX2 1941 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 A0A087WZG4 1122 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 TRAPPC3O43617 180 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 NEBLO76041 1014 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 PARP1P09874 1014 aaKnown RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 SRGNP10124 158 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 LTKP29376 864 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 HNRNPH3P31942 346 aaKnown RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 PIP4K2AP48426 406 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 CCNHP51946 323 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 IFFO1Q0D2I5 559 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 SCARF1Q14162 830 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 ZNF658Q5TYW1 1059 aaPredicted RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 TATDN2Q93075 761 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 HINFPQ9BQA5 517 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 TSGA10Q9BZW7 698 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 SH2D4AQ9H788 454 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 RBM28Q9NW13 759 aaKnown RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
CD46-201ENST00000322875 TACC3Q9Y6A5 838 aa8.7□□□□□ -1.02
CD46-201ENST00000322875 H7C1D1 291 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 MYL6BP14649 208 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 SLC8A1P32418 973 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 CYLC1P35663 651 aaPredicted RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 ABTB2Q8N961 1025 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 NELFBQ8WX92 580 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 FERMT2Q96AC1 680 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 LRRC59Q96AG4 307 aaKnown RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 TMBIM4Q9HC24 238 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 JADE2Q9NQC1 790 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 VPS54Q9P1Q0 977 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 A0A1B0GUA9 196 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 A0A1W2PQJ5 194 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 H0YGN5 161 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 GLI1P08151 1106 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 MYBP10242 640 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 GHRP10912 638 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 EEF1GP26641 437 aaKnown RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 ZKSCAN8Q15776 578 aaPredicted RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 C1orf141Q5JVX7 400 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 RNF187Q5TA31 235 aaPredicted RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 KIAA1328Q86T90 577 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 RETREG2Q8NC44 543 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 CCT6BQ92526 530 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 P3H4Q92791 437 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 CCDC43Q96MW1 224 aaKnown RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 MYL10Q9BUA6 226 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 AGPAT5Q9NUQ2 364 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 NFS1Q9Y697 457 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 MYH6P13533 1939 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 STRCP1A6NGW2 1772 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 B4E1Z4 1266 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 WNT7AO00755 349 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 TCP1P17987 556 aaKnown RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 HSPA9P38646 679 aaKnown RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 SCTRP47872 440 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 SAFBQ15424 915 aaKnown RBP eCLIP8.69□□□□□ -1.026e-6■□□□□ 10.7
CD46-201ENST00000322875 QPCTQ16769 361 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 FIGNQ5HY92 759 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 EARS2Q5JPH6 523 aaKnown RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 CRACR2BQ8N4Y2 399 aaPredicted RBP8.69□□□□□ -1.02
CD46-201ENST00000322875 RASSF8Q8NHQ8 419 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 RUFY1Q96T51 708 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 HAUS2Q9NVX0 235 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
CD46-201ENST00000322875 GOLGA6L7A0A1B0GV03 622 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 PPIP5K2O43314 1243 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 GTPBP6O43824 516 aaPredicted RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 EZRP15311 586 aaKnown RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 CARSP49589 748 aaKnown RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 ZBED6P86452 979 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 MAP2K1Q02750 393 aaPredicted RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 RRAGBQ5VZM2 374 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 CRELD2Q6UXH1 353 aaPredicted RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 ADSSL1Q8N142 457 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 EIF1ADQ8N9N8 165 aaKnown RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 TNFRSF25Q93038 417 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 THAP9Q9H5L6 903 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 BATF3Q9NR55 127 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 RBM12Q9NTZ6 932 aaKnown RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 HYOU1Q9Y4L1 999 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 GMNCA6NCL1 334 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 PJA2O43164 708 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 DEXIO95424 95 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 PRCPP42785 496 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 CDR1P51861 262 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 RCAN1P53805 252 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 ALX1Q15699 326 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 CDC37Q16543 378 aaPredicted RBP8.68□□□□□ -1.02
CD46-201ENST00000322875 CFAP58Q5T655 872 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 LRIG3Q6UXM1 1119 aa8.68□□□□□ -1.02
CD46-201ENST00000322875 CCDC121Q6ZUS5 278 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms