RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 ANKRD35Q8N283 1001 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 PRPF38AQ8NAV1 312 aaKnown RBP23.51■■□□□ 1.35
SSNA1-201ENST00000322310 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 HERVK_113Q902F9 699 aa23.51■■□□□ 1.35
SSNA1-201ENST00000322310 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.51■■□□□ 1.35
SSNA1-201ENST00000322310 CCER2I3L3R5 266 aa23.5■■□□□ 1.35
SSNA1-201ENST00000322310 CD4P01730 458 aa23.5■■□□□ 1.35
SSNA1-201ENST00000322310 KIFC2Q96AC6 838 aa23.5■■□□□ 1.35
SSNA1-201ENST00000322310 GREB1LQ9C091 1923 aaPredicted RBP23.5■■□□□ 1.35
SSNA1-201ENST00000322310 UMODL1Q5DID0 1318 aa23.5■■□□□ 1.35
SSNA1-201ENST00000322310 REV3LO60673 3130 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 ATP2A1O14983 1001 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 RASA1P20936 1047 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 UBE3CQ15386 1083 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 OTOP2Q7RTS6 562 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 CCDC144CPQ8IYA2 1237 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 IL27Q8NEV9 243 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 NECAB3Q96P71 396 aaPredicted RBP23.49■■□□□ 1.35
SSNA1-201ENST00000322310 KATNBL1Q9H079 304 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 PUS7LQ9H0K6 701 aaKnown RBP23.49■■□□□ 1.35
SSNA1-201ENST00000322310 SLC28A3Q9HAS3 691 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 CTDP1Q9Y5B0 961 aaPredicted RBP23.49■■□□□ 1.35
SSNA1-201ENST00000322310 MCM3APO60318 1980 aa23.49■■□□□ 1.35
SSNA1-201ENST00000322310 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.48■■□□□ 1.35
SSNA1-201ENST00000322310 ZBED4O75132 1171 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 FGBP02675 491 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 CXCL17Q6UXB2 119 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 HAUS7Q99871 368 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 HIPK3Q9H422 1215 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 NYAP2Q9P242 653 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 ARPP21Q9UBL0 812 aaPredicted RBP23.48■■□□□ 1.35
SSNA1-201ENST00000322310 MYO9BQ13459 2157 aa23.48■■□□□ 1.35
SSNA1-201ENST00000322310 GBF1Q92538 1859 aa23.47■■□□□ 1.35
SSNA1-201ENST00000322310 ATP5JP18859 108 aa23.47■■□□□ 1.35
SSNA1-201ENST00000322310 RABGGTBP53611 331 aa23.47■■□□□ 1.35
SSNA1-201ENST00000322310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.47■■□□□ 1.35
SSNA1-201ENST00000322310 SLC38A10Q9HBR0 1119 aa23.47■■□□□ 1.35
SSNA1-201ENST00000322310 CLIP2Q9UDT6 1046 aa23.47■■□□□ 1.35
SSNA1-201ENST00000322310 ASTN1O14525 1302 aa23.47■■□□□ 1.35
SSNA1-201ENST00000322310 BDP1A6H8Y1 2624 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 PTGS1P23219 599 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 PLA2G5P39877 138 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 CCL23P55773 120 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 CNTN2Q02246 1040 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 MICALL1Q8N3F8 863 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 SLC43A3Q8NBI5 491 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 MTIF3Q9H2K0 278 aaKnown RBP23.46■■□□□ 1.35
SSNA1-201ENST00000322310 MKNK2Q9HBH9 465 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 HOMER2Q9NSB8 354 aa23.46■■□□□ 1.35
SSNA1-201ENST00000322310 MYOGP15173 224 aa23.45■■□□□ 1.34
SSNA1-201ENST00000322310 NKX3-2P78367 333 aa23.45■■□□□ 1.34
SSNA1-201ENST00000322310 TNFAIP2Q03169 654 aa23.45■■□□□ 1.34
SSNA1-201ENST00000322310 NOL8Q76FK4 1167 aaKnown RBP23.45■■□□□ 1.34
SSNA1-201ENST00000322310 SIRT2Q8IXJ6 389 aa23.45■■□□□ 1.34
SSNA1-201ENST00000322310 FBXO40Q9UH90 709 aa23.45■■□□□ 1.34
SSNA1-201ENST00000322310 GRIN2DO15399 1336 aa23.44■■□□□ 1.34
SSNA1-201ENST00000322310 TFF2Q03403 129 aa23.44■■□□□ 1.34
SSNA1-201ENST00000322310 CHST13Q8NET6 341 aa23.44■■□□□ 1.34
SSNA1-201ENST00000322310 TRPV6Q9H1D0 765 aa23.44■■□□□ 1.34
SSNA1-201ENST00000322310 DDX49Q9Y6V7 483 aaKnown RBP23.44■■□□□ 1.34
SSNA1-201ENST00000322310 MINDY4BA8MYZ0 360 aa23.43■■□□□ 1.34
SSNA1-201ENST00000322310 ITGA7Q13683 1181 aa23.43■■□□□ 1.34
SSNA1-201ENST00000322310 PPP2R2DQ66LE6 453 aa23.43■■□□□ 1.34
SSNA1-201ENST00000322310 FAM122AQ96E09 287 aa23.43■■□□□ 1.34
SSNA1-201ENST00000322310 NOC4LQ9BVI4 516 aaKnown RBP23.43■■□□□ 1.34
SSNA1-201ENST00000322310 WNT8AQ9H1J5 351 aa23.43■■□□□ 1.34
SSNA1-201ENST00000322310 MYH7P12883 1935 aa23.43■■□□□ 1.34
SSNA1-201ENST00000322310 IGKV6D-41A0A0C4DH26 115 aa23.42■■□□□ 1.34
SSNA1-201ENST00000322310 FSCN1Q16658 493 aaKnown RBP23.42■■□□□ 1.34
SSNA1-201ENST00000322310 SBK1Q52WX2 424 aa23.42■■□□□ 1.34
SSNA1-201ENST00000322310 TLK2Q86UE8 772 aa23.42■■□□□ 1.34
SSNA1-201ENST00000322310 LRRC47Q8N1G4 583 aaKnown RBP23.42■■□□□ 1.34
SSNA1-201ENST00000322310 FAM133AQ8N9E0 248 aa23.42■■□□□ 1.34
SSNA1-201ENST00000322310 STRBPQ96SI9 672 aaKnown RBP23.42■■□□□ 1.34
SSNA1-201ENST00000322310 FEM1BQ9UK73 627 aa23.42■■□□□ 1.34
SSNA1-201ENST00000322310 GNEQ9Y223 722 aaKnown RBP23.42■■□□□ 1.34
SSNA1-201ENST00000322310 NCOR1O75376 2440 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 SOWAHBA6NEL2 793 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 GSG1L2A8MUP6 293 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 B4GALT4O60513 344 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 RAB11FIP3O75154 756 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 HMMRO75330 724 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 PRDM1O75626 825 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 BMP1P13497 986 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 OAZ1P54368 228 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 ZSCAN25Q6NSZ9 544 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 RPAP2Q8IXW5 612 aaPredicted RBP23.41■■□□□ 1.34
SSNA1-201ENST00000322310 VWCEQ96DN2 955 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 CEP95Q96GE4 821 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 TSPYL2Q9H2G4 693 aaPredicted RBP23.41■■□□□ 1.34
SSNA1-201ENST00000322310 SLC4A7Q9Y6M7 1214 aa23.41■■□□□ 1.34
SSNA1-201ENST00000322310 TCF20Q9UGU0 1960 aaKnown RBP23.4■■□□□ 1.34
SSNA1-201ENST00000322310 CABYRO75952 493 aa23.4■■□□□ 1.34
SSNA1-201ENST00000322310 KCNQ1P51787 676 aa23.4■■□□□ 1.34
SSNA1-201ENST00000322310 PSMC6P62333 389 aa23.4■■□□□ 1.34
SSNA1-201ENST00000322310 SCLYQ96I15 445 aa23.4■■□□□ 1.34
SSNA1-201ENST00000322310 A1CFQ9NQ94 594 aaKnown RBP23.4■■□□□ 1.34
SSNA1-201ENST00000322310 MYH4Q9Y623 1939 aa23.39■■□□□ 1.34
SSNA1-201ENST00000322310 ZBBXA8MT70 800 aa23.39■■□□□ 1.33
SSNA1-201ENST00000322310 DYNC1LI2O43237 492 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms