RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PDE4DQ08499 809 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 TUBGCP2Q9BSJ2 902 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 FCER1AP12319 257 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 CYLC1P35663 651 aaPredicted RBP15.85■□□□□ 0.13
PABPC1-201ENST00000318607 MAP2K2P36507 400 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 PAFAH1B1P43034 410 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 C8orf74Q6P047 294 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 NAA15Q9BXJ9 866 aaKnown RBP15.85■□□□□ 0.13
PABPC1-201ENST00000318607 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 USP17L21D6R901 530 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 SARSP49591 514 aaKnown RBP15.85■□□□□ 0.13
PABPC1-201ENST00000318607 LETM2Q2VYF4 491 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 CT47A1Q5JQC4 288 aaPredicted RBP15.85■□□□□ 0.13
PABPC1-201ENST00000318607 TICAM2Q86XR7 235 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 ZCRB1Q8TBF4 217 aaKnown RBP15.85■□□□□ 0.13
PABPC1-201ENST00000318607 EPB41L5Q9HCM4 733 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 RAB21Q9UL25 225 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
PABPC1-201ENST00000318607 JCADQ9P266 1359 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 TSPY2A6NKD2 308 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 MKRN4PQ13434 485 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 APTXQ7Z2E3 356 aaKnown RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 IQCA1Q86XH1 822 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 TSEN2Q8NCE0 465 aaKnown RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 ESR2Q92731 530 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 CCDC113Q9H0I3 377 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 PDE8BO95263 885 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 HNRNPH1P31943 449 aaKnown RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 CFAP58Q5T655 872 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 LRP10Q7Z4F1 713 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 ZNF831Q5JPB2 1677 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
PABPC1-201ENST00000318607 CPDO75976 1380 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 CYP2D6P10635 497 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 KCNQ4P56696 695 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 NNTQ13423 1086 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 NAA35Q5VZE5 725 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 MTRQ99707 1265 aa15.84■□□□□ 0.13
PABPC1-201ENST00000318607 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.13
PABPC1-201ENST00000318607 TLDC2A0PJX2 215 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 PSMA7O14818 248 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 USP5P45974 858 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 GSDMAQ96QA5 445 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 CDHR2Q9BYE9 1310 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 COL18A1P39060 1754 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 A0A087WUV0 522 aaPredicted RBP15.83■□□□□ 0.12
PABPC1-201ENST00000318607 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
PABPC1-201ENST00000318607 SLC20A2Q08357 652 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 GIMAP7Q8NHV1 300 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 SHISA4Q96DD7 197 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 MYCBPQ99417 103 aaPredicted RBP15.83■□□□□ 0.12
PABPC1-201ENST00000318607 KRT12Q99456 494 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 HAUS4Q9H6D7 363 aa15.83■□□□□ 0.12
PABPC1-201ENST00000318607 AATFQ9NY61 560 aaKnown RBP eCLIP15.83■□□□□ 0.12
PABPC1-201ENST00000318607 TMCO5BA8MYB1 307 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 GUCY2CP25092 1073 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 KRT83P78385 493 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 EHHADHQ08426 723 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 PRPF4BQ13523 1007 aaKnown RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 CEP85LQ5SZL2 805 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 SPTY2D1Q68D10 685 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 CCNI2Q6ZMN8 369 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 MMS22LQ6ZRQ5 1243 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 HNRNPLLQ8WVV9 542 aaKnown RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 GJA10Q969M2 543 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 TBC1D31Q96DN5 1066 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 GOLGA6L7A0A1B0GV03 622 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 TACC1O75410 805 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 CARSP49589 748 aaKnown RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 GFPT1Q06210 699 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 DDX42Q86XP3 938 aaKnown RBP eCLIP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 ENAHQ8N8S7 591 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 PSD3Q9NYI0 1048 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 AHDC1Q5TGY3 1603 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 FAM153BP0C7A2 387 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 EIF4A3P38919 411 aaKnown RBP15.82■□□□□ 0.12
PABPC1-201ENST00000318607 MAGEA1P43355 309 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 FAM153CQ494X1 144 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 TAX1BP1Q86VP1 789 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 TRIML1Q8N9V2 468 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 GOPCQ9HD26 462 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 FAM153AQ9UHL3 310 aa15.82■□□□□ 0.12
PABPC1-201ENST00000318607 USO1O60763 962 aaKnown RBP15.81■□□□□ 0.12
PABPC1-201ENST00000318607 SLC5A1P13866 664 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 CDR1P51861 262 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 CKAP4Q07065 602 aaKnown RBP15.81■□□□□ 0.12
PABPC1-201ENST00000318607 GBP6Q6ZN66 633 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 TRMT1LQ7Z2T5 733 aaKnown RBP15.81■□□□□ 0.12
PABPC1-201ENST00000318607 ADGRA1Q86SQ6 560 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 CCDC114Q96M63 670 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 TFCP2L1Q9NZI6 479 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 GGT7Q9UJ14 662 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 AGPSO00116 658 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms