RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HIBCHQ6NVY1 386 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 NBPF5PQ86XG9 351 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 CCDC87Q9NVE4 849 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 SUFUQ9UMX1 484 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 KIF1AQ12756 1690 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 FAM205CA6NFA0 338 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 ZRANB2O95218 330 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 CTNNA1P35221 906 aaKnown RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 SEPT7Q16181 437 aaKnown RBP8.37□□□□□ -1.07
CDHR3-201ENST00000317716 ARFGAP2Q8N6H7 521 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 CD2APQ9Y5K6 639 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 LTN1O94822 1766 aa8.37□□□□□ -1.07
CDHR3-201ENST00000317716 GCOM1H8Y6P7 765 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 SKAP2O75563 359 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 HEXIM1O94992 359 aaKnown RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 IGKV5-2P06315 115 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 MYZAPP0CAP1 466 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 PTGDRQ13258 359 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 FAM133BQ5BKY9 247 aaKnown RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 ZMYM1Q5SVZ6 1142 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 IFT20Q8IY31 132 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 LBHD1Q9BQE6 289 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 HAUS4Q9H6D7 363 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 MLXIPQ9HAP2 919 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 BMP2KQ9NSY1 1161 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 STK32BQ9NY57 414 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 KRT14P02533 472 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 HNRNPH1P31943 449 aaKnown RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 TUBB4BP68371 445 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 SDR42E1Q8WUS8 393 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 TSG101Q99816 390 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-201ENST00000317716 SENP2Q9HC62 589 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 GGT7Q9UJ14 662 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 CEP83Q9Y592 693 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 DEXIO95424 95 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 CORO7P57737 925 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 APBA1Q02410 837 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 NELFCDQ8IXH7 590 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 ESR2Q92731 530 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 KRT23Q9C075 422 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 RGPD2P0DJD1 1756 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 BCL9LQ86UU0 1499 aa8.36□□□□□ -1.07
CDHR3-201ENST00000317716 MON2Q7Z3U7 1717 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 TRAF5O00463 557 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 KCNK3O14649 394 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 PRKAB2O43741 272 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 GUCY1A2P33402 732 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 PCK1P35558 622 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 PAK2Q13177 524 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 NEDD9Q14511 834 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 NCAPHQ15003 741 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 SNCBQ16143 134 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 CCDC6Q16204 474 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 HLFQ16534 295 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 NBPF14Q5TI25 921 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 NFRKBQ6P4R8 1299 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 ANKS4BQ8N8V4 417 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 ANKRD42Q8N9B4 389 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 SAMD15Q9P1V8 674 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 CPSF2Q9P2I0 782 aaKnown RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 PARP1P09874 1014 aaKnown RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 TUBB2AQ13885 445 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 KIAA0753Q2KHM9 967 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 FAM47AQ5JRC9 791 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 CACNA2D3Q8IZS8 1091 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 TUBB2BQ9BVA1 445 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 PACSIN2Q9UNF0 486 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 ZMYM6O95789 1325 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 AKAP12Q02952 1782 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 IRS4O14654 1257 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 SLC5A1P13866 664 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 IRAK1P51617 712 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 TNNC1P63316 161 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 ZKSCAN8Q15776 578 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 RBM43Q6ZSC3 357 aaKnown RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 TBC1D1Q86TI0 1168 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 COG1Q8WTW3 980 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 THOC1Q96FV9 657 aaKnown RBP8.35□□□□□ -1.07
CDHR3-201ENST00000317716 CALML4Q96GE6 196 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 FAM167BQ9BTA0 163 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 ANKZF1Q9H8Y5 726 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 SLC39A2Q9NP94 309 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 ABHD10Q9NUJ1 306 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 L1RE1Q9UN81 338 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 KDRP35968 1356 aa8.35□□□□□ -1.07
CDHR3-201ENST00000317716 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 TTC26A0AVF1 554 aa8.34□□□□□ -1.07
CDHR3-201ENST00000317716 GOLGA8KD6RF30 607 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms