RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LEO1Q8WVC0 666 aaPredicted RBP5.55□□□□□ -1.52
SMCO3-201ENST00000316048 HEXIM2Q96MH2 286 aaKnown RBP5.55□□□□□ -1.52
SMCO3-201ENST00000316048 YIPF2Q9BWQ6 316 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 HOMER2Q9NSB8 354 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 ADAMTS8Q9UP79 889 aa5.55□□□□□ -1.52
SMCO3-201ENST00000316048 BAZ1BQ9UIG0 1483 aaKnown RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 KPNA6O60684 536 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 S100BP04271 92 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 SCRN1Q12765 414 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 SKOR2Q2VWA4 1001 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 BRDTQ58F21 947 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 SLC35F1Q5T1Q4 408 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 BEND4Q6ZU67 534 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 USP53Q70EK8 1073 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 FAM214BQ7L5A3 538 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 GATA6Q92908 595 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 TMX1Q9H3N1 280 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 METTL14Q9HCE5 456 aaKnown RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 GPRC5CQ9NQ84 441 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 THRAP3Q9Y2W1 955 aaKnown RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 ARNTLO00327 626 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 PIK3R2O00459 728 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 SIGLEC6O43699 453 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 IFNGR1P15260 489 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 SOX5P35711 763 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 STRN3Q13033 797 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 NMIQ13287 307 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 CRACR2BQ8N4Y2 399 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 KREMEN2Q8NCW0 462 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 JDP2Q8WYK2 163 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 KCTD13Q8WZ19 329 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 PRDM5Q9NQX1 630 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 CHST7Q9NS84 486 aa5.54□□□□□ -1.52
SMCO3-201ENST00000316048 MAGEC2Q9UBF1 373 aaPredicted RBP5.54□□□□□ -1.52
SMCO3-201ENST00000316048 DNAJC25-GNG10A0A024R161 153 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 A0A087WZG4 1122 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 WASH4PA8MWX3 477 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 C9orf172C9J069 976 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 APBA3O96018 575 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 CD3EP07766 207 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 GABREP78334 506 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 AMPD2Q01433 879 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 TNK2Q07912 1038 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 MAP4K2Q12851 820 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 UVSSAQ2YD98 709 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 ODR4Q5SWX8 454 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 SFRP5Q5T4F7 317 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 DDX1Q92499 740 aaKnown RBP5.53□□□□□ -1.52
SMCO3-201ENST00000316048 MTFR1LQ9H019 292 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 TMEFF2Q9UIK5 374 aaPredicted RBP5.53□□□□□ -1.52
SMCO3-201ENST00000316048 MAPRE3Q9UPY8 281 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
SMCO3-201ENST00000316048 PCDHA9Q9Y5H5 950 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 HMX2A2RU54 273 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 OPA1O60313 960 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 CRTAMO95727 393 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 THBDP07204 575 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 GRB10Q13322 594 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 ABHD17CQ6PCB6 329 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 NOL8Q76FK4 1167 aaKnown RBP5.53□□□□□ -1.52
SMCO3-201ENST00000316048 BEND7Q8N7W2 519 aaPredicted RBP5.53□□□□□ -1.52
SMCO3-201ENST00000316048 PTPRN2Q92932 1015 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 HDAC8Q9BY41 377 aa5.53□□□□□ -1.52
SMCO3-201ENST00000316048 INTS7Q9NVH2 962 aaKnown RBP5.53□□□□□ -1.52
SMCO3-201ENST00000316048 EIF4G1Q04637 1599 aaKnown RBP5.52□□□□□ -1.53
SMCO3-201ENST00000316048 TCRBV16S1A1N1A0A5B0 115 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 EYA4O95677 639 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 SCG5P05408 212 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 JMJD7P0C870 316 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 HOXC12P31275 282 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 CHRNA4P43681 627 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 TXNRD3Q86VQ6 643 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 TBC1D32Q96NH3 1257 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 CYP26B1Q9NR63 512 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 CHPF2Q9P2E5 772 aa5.52□□□□□ -1.53
SMCO3-201ENST00000316048 KATNA1O75449 491 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 NEK4P51957 841 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 ZNF765Q7L2R6 523 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 CCDC103Q8IW40 242 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 ATL2Q8NHH9 583 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 FRS2Q8WU20 508 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 TYW1Q9NV66 732 aaKnown RBP5.51□□□□□ -1.53
SMCO3-201ENST00000316048 NCAPD3P42695 1498 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 FAM170BA6NMN3 283 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 WIPF1O43516 503 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 MSCO60682 206 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 CYP7A1P22680 504 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 PAOXQ6QHF9 649 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 PPIL6Q8IXY8 311 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 COPS5Q92905 334 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 FCRL3Q96P31 734 aaPredicted RBP5.51□□□□□ -1.53
SMCO3-201ENST00000316048 NACC1Q96RE7 527 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 MCM8Q9UJA3 840 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 SF3B6Q9Y3B4 125 aaKnown RBP5.51□□□□□ -1.53
SMCO3-201ENST00000316048 PCDHA8Q9Y5H6 950 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 CAPN6Q9Y6Q1 641 aa5.51□□□□□ -1.53
SMCO3-201ENST00000316048 LCP1P13796 627 aa5.5□□□□□ -1.53
SMCO3-201ENST00000316048 ITIH2P19823 946 aa5.5□□□□□ -1.53
SMCO3-201ENST00000316048 IGFALSP35858 605 aa5.5□□□□□ -1.53
SMCO3-201ENST00000316048 ID4P47928 161 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms