RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 KIAA1328Q86T90 577 aa15.06■□□□□ 0
SKA3-202ENST00000314759 ZNF384Q8TF68 577 aa15.06■□□□□ 0
SKA3-202ENST00000314759 HINFPQ9BQA5 517 aa15.06■□□□□ 0
SKA3-202ENST00000314759 GNL3LQ9NVN8 582 aaKnown RBP15.06■□□□□ 0
SKA3-202ENST00000314759 DUSP10Q9Y6W6 482 aa15.06■□□□□ 0
SKA3-202ENST00000314759 BCL9O00512 1426 aa15.05■□□□□ 0
SKA3-202ENST00000314759 NHSL1Q5SYE7 1610 aa15.05■□□□□ 0
SKA3-202ENST00000314759 RASSF10A6NK89 507 aa15.05■□□□□ 0
SKA3-202ENST00000314759 B4DLN1 442 aa15.05■□□□□ 0
SKA3-202ENST00000314759 PDE2AO00408 941 aaPredicted RBP15.05■□□□□ 0
SKA3-202ENST00000314759 EEF2KMTQ96G04 330 aa15.05■□□□□ 0
SKA3-202ENST00000314759 TTYH3Q9C0H2 523 aa15.05■□□□□ 0
SKA3-202ENST00000314759 THAP9Q9H5L6 903 aa15.05■□□□□ 0
SKA3-202ENST00000314759 PP2D1A8MPX8 630 aa15.05■□□□□ -0
SKA3-202ENST00000314759 KRT86O43790 486 aa15.05■□□□□ -0
SKA3-202ENST00000314759 KLRC4O43908 158 aa15.05■□□□□ -0
SKA3-202ENST00000314759 STIM1Q13586 685 aa15.05■□□□□ -0
SKA3-202ENST00000314759 FAM47AQ5JRC9 791 aa15.05■□□□□ -0
SKA3-202ENST00000314759 RPGRIP1Q96KN7 1286 aa15.05■□□□□ -0
SKA3-202ENST00000314759 RABEP2Q9H5N1 569 aa15.05■□□□□ -0
SKA3-202ENST00000314759 ZNF804BA4D1E1 1349 aa15.05■□□□□ -0
SKA3-202ENST00000314759 FAM205AQ6ZU69 1335 aa15.05■□□□□ -0
SKA3-202ENST00000314759 SRGNP10124 158 aa15.04■□□□□ -0
SKA3-202ENST00000314759 KLK7P49862 253 aa15.04■□□□□ -0
SKA3-202ENST00000314759 DNM2P50570 870 aa15.04■□□□□ -0
SKA3-202ENST00000314759 DNAJC21Q5F1R6 531 aaKnown RBP15.04■□□□□ -0
SKA3-202ENST00000314759 EHBP1Q8NDI1 1231 aa15.04■□□□□ -0
SKA3-202ENST00000314759 TRIM47Q96LD4 638 aa15.04■□□□□ -0
SKA3-202ENST00000314759 EHD4Q9H223 541 aa15.04■□□□□ -0
SKA3-202ENST00000314759 CICQ96RK0 1608 aaPredicted RBP15.04■□□□□ -0
SKA3-202ENST00000314759 ITGB4P16144 1822 aa15.04■□□□□ -0
SKA3-202ENST00000314759 PCP11498 1178 aaKnown RBP15.04■□□□□ -0
SKA3-202ENST00000314759 GGCXP38435 758 aa15.04■□□□□ -0
SKA3-202ENST00000314759 CKAP4Q07065 602 aaKnown RBP15.04■□□□□ -0
SKA3-202ENST00000314759 TTI2Q6NXR4 508 aa15.04■□□□□ -0
SKA3-202ENST00000314759 CCNI2Q6ZMN8 369 aaPredicted RBP15.04■□□□□ -0
SKA3-202ENST00000314759 MICALL1Q8N3F8 863 aa15.04■□□□□ -0
SKA3-202ENST00000314759 NHEJ1Q9H9Q4 299 aaPredicted RBP15.04■□□□□ -0
SKA3-202ENST00000314759 GEMIN8Q9NWZ8 242 aaKnown RBP15.04■□□□□ -0
SKA3-202ENST00000314759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.04■□□□□ -0
SKA3-202ENST00000314759 COL1A1P02452 1464 aaPredicted RBP15.04■□□□□ -0
SKA3-202ENST00000314759 AGPSO00116 658 aa15.03■□□□□ -0
SKA3-202ENST00000314759 KCNB1Q14721 858 aa15.03■□□□□ -0
SKA3-202ENST00000314759 TADA2BQ86TJ2 420 aa15.03■□□□□ -0
SKA3-202ENST00000314759 RASGRP4Q8TDF6 673 aa15.03■□□□□ -0
SKA3-202ENST00000314759 PLIN2Q99541 437 aa15.03■□□□□ -0
SKA3-202ENST00000314759 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
SKA3-202ENST00000314759 EXOC5O00471 708 aa15.03■□□□□ -0
SKA3-202ENST00000314759 PSMA7O14818 248 aa15.03■□□□□ -0
SKA3-202ENST00000314759 TRIM21P19474 475 aaKnown RBP15.03■□□□□ -0
SKA3-202ENST00000314759 CYLC1P35663 651 aaPredicted RBP15.03■□□□□ -0
SKA3-202ENST00000314759 CYP27A1Q02318 531 aa15.03■□□□□ -0
SKA3-202ENST00000314759 EFCAB13Q8IY85 973 aa15.03■□□□□ -0
SKA3-202ENST00000314759 BLIDQ8IZY5 108 aa15.03■□□□□ -0
SKA3-202ENST00000314759 GIMAP8Q8ND71 665 aaPredicted RBP15.03■□□□□ -0
SKA3-202ENST00000314759 KAT2BQ92831 832 aa15.03■□□□□ -0
SKA3-202ENST00000314759 DUSP9Q99956 384 aaKnown RBP15.03■□□□□ -0
SKA3-202ENST00000314759 TUBGCP2Q9BSJ2 902 aa15.03■□□□□ -0
SKA3-202ENST00000314759 SELENOOQ9BVL4 669 aa15.03■□□□□ -0
SKA3-202ENST00000314759 MAGEC2Q9UBF1 373 aaPredicted RBP15.03■□□□□ -0
SKA3-202ENST00000314759 RHOBTB3O94955 611 aa15.03■□□□□ -0
SKA3-202ENST00000314759 EIF5P55010 431 aaKnown RBP15.03■□□□□ -0
SKA3-202ENST00000314759 CAGE1Q8TC20 777 aa15.03■□□□□ -0
SKA3-202ENST00000314759 LRRC15Q8TF66 581 aa15.03■□□□□ -0
SKA3-202ENST00000314759 TMEM60Q9H2L4 133 aa15.03■□□□□ -0
SKA3-202ENST00000314759 EXOC1Q9NV70 894 aa15.03■□□□□ -0
SKA3-202ENST00000314759 CACNA1SQ13698 1873 aa15.03■□□□□ -0
SKA3-202ENST00000314759 MACROD2A1Z1Q3 448 aa15.02■□□□□ -0
SKA3-202ENST00000314759 DTHD1Q6ZMT9 781 aa15.02■□□□□ -0
SKA3-202ENST00000314759 RASSF8Q8NHQ8 419 aa15.02■□□□□ -0
SKA3-202ENST00000314759 GPKOWQ92917 476 aaPredicted RBP eCLIP15.02■□□□□ -0
SKA3-202ENST00000314759 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
SKA3-202ENST00000314759 PURBQ96QR8 312 aaKnown RBP15.02■□□□□ -0
SKA3-202ENST00000314759 KAT14Q9H8E8 782 aa15.02■□□□□ -0
SKA3-202ENST00000314759 JADE2Q9NQC1 790 aa15.02■□□□□ -0
SKA3-202ENST00000314759 KBTBD4Q9NVX7 518 aa15.02■□□□□ -0
SKA3-202ENST00000314759 ANO9A1A5B4 782 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 ORC4O43929 436 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 CPP00450 1065 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 IDEP14735 1019 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 CCT5P48643 541 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 LIG3P49916 1009 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 TBC1D8BQ0IIM8 1120 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 CCDC170Q8IYT3 715 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 CSGALNACT2Q8N6G5 542 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 CRACR2AQ9BSW2 395 aa15.02□□□□□ -0.01
SKA3-202ENST00000314759 CALML3P27482 149 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 ZBED6P86452 979 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 C2orf54Q08AI8 447 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 ZNHIT6Q9NWK9 470 aaKnown RBP15.01□□□□□ -0.01
SKA3-202ENST00000314759 COL4A1P02462 1669 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 A0A087WUV0 522 aaPredicted RBP15.01□□□□□ -0.01
SKA3-202ENST00000314759 IPO7O95373 1038 aaKnown RBP15.01□□□□□ -0.01
SKA3-202ENST00000314759 RCSD1Q6JBY9 416 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 PAXIP1Q6ZW49 1069 aaPredicted RBP15.01□□□□□ -0.01
SKA3-202ENST00000314759 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 DEF6Q9H4E7 631 aa15.01□□□□□ -0.01
SKA3-202ENST00000314759 PCDHA4Q9UN74 947 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms